VIOLIN Logo
VO Banner
Search: for Help
About
Introduction
Statistics
VIOLIN News
Your VIOLIN
Register or Login
Submission
Tutorial
Vaccine & Components
Vaxquery
Vaxgen
VBLAST
Protegen
VirmugenDB
DNAVaxDB
CanVaxKB
Vaxjo
Vaxvec
Vevax
Huvax
Cov19VaxKB
Host Responses
VaximmutorDB
VIGET
Vaxafe
Vaxar
Vaxism
Vaccine Literature
VO-SciMiner
Litesearch
Vaxmesh
Vaxlert
Vaccine Design
Vaxign2
Vaxign
Community Efforts
Vaccine Ontology
ICoVax 2012
ICoVax 2013
Advisory Committee
Vaccine Society
Vaxperts
VaxPub
VaxCom
VaxLaw
VaxMedia
VaxMeet
VaxFund
VaxCareer
Data Exchange
V-Utilities
VIOLINML
Help & Documents
Publications
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UM Logo

YopM

Gene Name YopM
Sequence Strain (Species/Organism) Yersinia pestis CO92
NCBI Gene ID 1172671
NCBI Protein GI 16082715
Locus Tag YPCD1.26c
Genbank Accession AL117189
Protein Accession NP_395161
Taxonomy ID 214092
Plasmid No pCD1
Gene Starting Position 16335
Gene Ending Position 17564
Gene Strand (Orientation) -
Protein Name secreted effector protein
Protein pI 4.06
Protein Weight 44415.15
Protein Length 409
DNA Sequence
>gi|16082691:16335-17564 Yersinia pestis CO92 plasmid pCD1, complete sequence
ACTACTCAAATACATCATCTTCAAGTTTGTCTGTAGTCTCATGAGCAAATTCATATGGATCAACTACACG
TTCAGAGTTCATCCGAAGATCTTCCACTGACTCAGGTATATCGGGAAACTCTCTCAGAGGGTTGTACTCT
ACGTGGAGCTGTTTCAGGTTTTGCGGCAATTCAGGTACTTCAGCAAGATGATTAAATGAAGCGATTAAAC
GTTCTAAGCGTGGAGGTAACGCTGGCAGTTCGATCAACTTATTATTACTGACATTAAGTTCTTCCAGTGA
AGGGGGTAAATCGCATAAGGATCTTATTTCATTGCTGGATGCATTGAGATAATACAAGTTTGGTGGCAAT
TCCGATAATCCAGAAAAAATATTTTCAGAAACATCTAAGAAGGTTAAACTCTGCGGTAATTCTGGCAGAT
CAGTTAAATAATTATCTCTGACATTAAGTGCTTCCAGGGAAGGGGGTAAATCGGGTAATGTTTTCAGTAA
ATTGTTATCAGCATAAATCGTAGTCAAGAAGGGCAAGTTTTGCAACTCTGGCAATTCTTCCAGAATATTA
TTACCAGCAACAATAGATTCCAGTGAAAGAGGTAAATCAGGTAGTTTTTTCAGTGAATTGTTATCAGCAT
AAATCGCAGTCAAGAAGGGCAAGTTTTGCAACTCTGGCAATTCTTCCAGCTGATTATTACCAGCAGCAAT
AAACTCCAGTGAAGGAGGTAAATCAGGTAGTTTTTTCAGTGAATTGTTATCAACATCAATAATTTTCAAG
AAGGACGAGTTTTGCAACTCTGGCAATTTTTCCAGCTGATTATTAGAGACACCTAAATATTCCAGTAAAG
GTGGTAAATCGGATAATGCCTTCAGATTGTTATTATCAACTAGAAGTGATTTCAGGCTCTGCGGTAATTC
CGGTAATTCTGTAAGAGAATTACATGACGCCACTAAACTCTCTAAATGCGGAGGTAATTCCGGCAAAGAA
CTCAGCCCCAGATTATTTAGTTCTAGCTCATGGGCTTGTCGGTCCAGGCAATCTCGTAACCTTGAAACCG
CCATTTCCCTCTGTTCACCATTCCCCGGAGGGGCATTTCGTTCCCATTCCGACCATGCATTATAATATTC
AGTCTTAGATTTAACATTTTCTGCCTCAACCGGCATCTCAGTTAAATTAGAAGAATGACGTAATGGTTCT
TGCAAAAAAGTATTAGATACATTTCTTGGATTTATGAACA
Protein Sequence
>gi|16082715|ref|NP_395161.1| secreted effector protein [Yersinia pestis CO92]
MFINPRNVSNTFLQEPLRHSSNLTEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD
RQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSN
NQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKL
PDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLT
FLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPRLERLIASFNHLA
EVPELPQNLKQLHVEYNPLREFPDIPESVEDLRMNSERVVDPYEFAHETTDKLEDDVFE
Molecule Role Other
References