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tnf-alpha

Gene Name tnf-alpha
Sequence Strain (Species/Organism) Oncorhynchus mykiss
NCBI Gene ID 100136034
NCBI Protein GI 185135733
Genbank Accession AJ278085
Protein Accession NP_001117829
Taxonomy ID 8022
Chromosome No 2
Gene Starting Position 19872679
Gene Ending Position 19874680
Gene Strand (Orientation) +
Protein Name tumour necrosis factor alpha-like
Protein pI 4.8
Protein Weight 25723.75
Protein Length 246
Protein Note Also known as tnfa
DNA Sequence 
>NC_035078.1:19872679-19874680 Oncorhynchus mykiss isolate Swanson chromosome 2, Omyk_1.0, whole genome shotgun sequence
AGCAAAACACAGGACACCTATCAAGCTACAACTCTGTCAAAACAAAAAAAGATATTTAGGAGATATTCGG
GCAAATATTCAGTCGCTAGACTTTTTCACTGCCACCAAGAGCCAAGAGTTTGAACCTTGTTCAACAGCAG
TATGGAGGGGTATGCGATGACACCTGAAGACATGGAGAGGGGCCCTGTGTACAACACAACGGTAACAGCT
GTCGCTGAGGGAAAGGCCTCCAGAGGTTGGCTATGGAGGCTGTGTGGGGTCCTCTTAATAGCAGGTCTAT
GTGCGGCAGCAGCCCTACTCTTTGCATGGTGTCAGCATGGAAGACCGTCAACGGTAAGGCACTCTAATGG
GGCCAATATTTACCACATTTCTGAAGTAGAGGACCGTGCAACCAACTAACATCCTCTTTGTTGATTTCAC
AGATGCAGGATGAAATTGAGCCTCAACTGGAGATACTCATTGGTGCAAAAGGTGATTATTTGATTGACAG
ATGCCCCTTTTCATTGAATTGCTTCTCACTATAATTGCTTTAATCAAAGGTTACGGTTGTAGGCGACGTC
ATGGCTTTTGCTTGTGTTATTTATGACTAATATGTTTCTCTCCCTCAGATACCCACCATACATTGAAGCA
GATTGCCGGCAATGCAAAAGCAGCCATCCATTTAGAGGGTGAGTGACCTATAGCCTTTTGCAGCCAGCCT
TGACTGTGTCTGTTGAAGGTTAGCAAATGTCTCGTGGGCTAGCATGTCTTAGTGTCTTTCCATTGTAGAA
GCTAGGGGATTCTTTTTAAACATCCCCATTCAAAAATAAGGTTTAATGTTTAAAACGGTGTCTAGTGGGC
TAGTAAGTGTTTCTATTGGAGAAGCCCTGGGATTTATTTTCAAACATTCCCATTGACAAAAACGAAACCA
TAACACAAGGAAGCAAAGAAGTTGCTTAATCATTAGCTTGTCTCTTGTTGCCACCAGAGCAAATTGATAA
GAGCTTTGTAAGAAGAAATAGCTACCAGTTGGATCCTGGGGCCTCAAAGTTGTAACAATGAACCTTTCTT
CCTTCTACTGCCAGGTGAATACAATCCTAATCTTTCCGCTGACACCGTGCAGTGGAGAAAGGATGACGGC
CAGGCTTTTTCCCAGGGCGGGTTCGAGCTACAGGGGAACCAAATCCTCATCCCACACACTGGGCTCTTCT
TCGTTTACAGCCAGGCTTCGTTTAGGGTCAAGTGCAATAGCCCGGGCGAGCATACCACTCCTCTGAGTCA
CATTATTTGGCGCTATTCGGACTCCATCGGGGTTAATGCTAATCTTCTTAGCGGGGTAAGGTCAGTTTGT
CAACAAAACTACGGTGATGCTGAGTCCAAAATTGGCGAAGGCTGGTACAATGCAGTTTACCTTGGTGCGG
TGTTTCAGCTGAATGAAGGGGACAAACTGTGGACTGAGACCAATCGACTGACCGACGTGGAGCCTGAGCA
GGGCAAGAACTTCTTTGGTGTGTTTGCACTGTGATGAGAGAGAGGCAGGCCAGAGATGAATATTTGTTAA
AACAGTTTTATGTTAAAACTCTTATTTTAGTGTTGCAATTTTATGGTAACTGAGCCATCTCAAAGGAGAT
TGGTCTAATCTTAATGGTTATTTTTGTAAACTGCAACAGTTTGAGAAATGATTATTGTTTGTCCACACAT
GATTGTCCATTCTCTCTATTGTAGATTTTGCACCAAATAATATTATGACTTCGGGTTATTTATATTAACT
TAAAAAACAGGATATTTACTATTTATTTGAAAATACAATAGGCTACTGTGGAGTACTGTAGTATAAGTTA
TCTTGATTCACATAAGTCTAGCAGTAGCCTATACTAGGCCTATCAGAATACAGTACTACAATATTAAGTT
ATTTTATTTAATGTACTGATGTACTAATGTTTATTTAAATGTGATTGTGTTGTATTTTATTTGTCACATA
TTCAGAGTGCTTGAATCAACTAATAAATTCCAAATCTTCTCA
Protein Sequence 
>NP_001117829.1 putative tumour necrosis factor alpha [Oncorhynchus mykiss]
MEGYAMTPEDMERGPVYNTTVTAVAEGKASRGWLWRLCGVLLIAGLCAAAALLFAWCQHGRPSTMQDEIE
PQLEILIGAKDTHHTLKQIAGNAKAAIHLEGEYNPNLSADTVQWRKDDGQAFSQGGFELQGNQILIPHTG
LFFVYSQASFRVKCNSPGEHTTPLSHIIWRYSDSIGVNANLLSGVRSVCQQNYGDAESEIGEGWYNAVYL
GAVFQLNEGDKLWTETNRLTDVEPEQGKNFFGVFAL
Molecule Role Protective antigen
Related Vaccines(s) Recombinant Human Fusion Protein L19TNFalpha Vaccine
References