VIOLIN Logo
VO Banner
Search: for Help
About
Introduction
Statistics
VIOLIN News
Your VIOLIN
Register or Login
Submission
Tutorial
Vaccine & Components
Vaxquery
Vaxgen
VBLAST
Protegen
VirmugenDB
DNAVaxDB
CanVaxKB
Vaxjo
Vaxvec
Vevax
Huvax
Cov19VaxKB
Host Responses
VaximmutorDB
VIGET
Vaxafe
Vaxar
Vaxism
Vaccine Literature
VO-SciMiner
Litesearch
Vaxmesh
Vaxlert
Vaccine Design
Vaxign2
Vaxign
Community Efforts
Vaccine Ontology
ICoVax 2012
ICoVax 2013
Advisory Committee
Vaccine Society
Vaxperts
VaxPub
VaxCom
VaxLaw
VaxMedia
VaxMeet
VaxFund
VaxCareer
Data Exchange
V-Utilities
VIOLINML
Help & Documents
Publications
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UM Logo

L1

Gene Name L1
Sequence Strain (Species/Organism) Human papillomavirus
NCBI Gene ID 25479185
NCBI Protein GI 922073271
Locus Tag AMQ97_gp6
Genbank Accession KP692117
Protein Accession YP_009163896
Taxonomy ID 10566
Gene Starting Position 5191
Gene Ending Position 6858
Gene Strand (Orientation) +
Protein Name L1
Protein pI 6.6
Protein Weight 59398.35
Protein Length 555
DNA Sequence
>NC_027779.1:5191-6858 Human papillomavirus isolate SE379, complete genome
GATGACTCTGTGGATGCAACATTCTGGAAAATTATACCTACCACCAGCAAAGCCAGTGGCCAAAGTATTA
AATACAGATGATTATGTTGTTGGAACAAATCTGTTTTTCCATGCCTCTTCTGAAAGATTATTAACGGTTG
GACACCCTTACTTTGAAATTCCAAATCAGGCTATACCCGGAGCTTTAGCTGTTCCAAAAGTCTCTGGATC
TCAATACAGAGTTTTTAGATGCTTATTACCAGATCCTAATAAATTTGCACTTATCGAAAAATCAATATAT
AATCCAGAAAGGGAACGATTAGTTTGGAAACTTAAAGGCTTACAATTAGGTCGTGGTGGACCGTTAGGGG
TTGGAACCAGTGGTCATCCTCTTTTTAATAAAGTGCTTGACACAGAAAATCCTAATGCTTATCCTCCAGA
ACAAACAGACGAACAAAGGCAAAATGTCAGCATGGATCCCAAACAGGTTCAGATGTTAATAGTAGGTTGC
GAACCAGCTATGGGTGAGCATTGGGATGTTGCAAAGCCGTGCGTTGGAGAACAAAATAATGGCGATTGTC
CACCTATTGAATTAGTCAGTTCAGTAATACAAGATGGTGATATGTGTGACACAGGATTTGGTGCAGCCAA
TTTTAGACGATTACAACAGGACAAATCAGGAGTTCCTTTAGATATAGTAGATAGTATTTGCAAATGGCCT
GATCTTATAAAAATGGAGCAAGAAGTATATGGAGATAAACTATTTTTTTTCACAAAACGGGAGCAGGCCT
ATGCCAGACATTATTTTGCACGAGCGGGTGATCCTGGAGATGCTATGCCCGATGGAACAGTCAATCAGGA
TATGTTTTATTACAGTCCTGATCGTTCTCAAGGCGCACTACCTCAGAACAAGCTAGCATCCCATATTTAC
TTCCCAACTGTAAGTGGCTCTCTAGTTTCTAGTGAAGCGCAGCTATTTAATAGACCATATTGGTTACAAA
AAGCTCAGGGACCCAACAATGGTATTTGTTGGAATAATAACTTATTCCTGACAGTAGTTGATAACACCAG
AAACACAAATTTTACTATATCAGTGTATAAGAATGGCGCATCTGTACCCACGCCATCACAGTACTCTTAT
AAAGCCAGTGATTTTAAACAGTATTTAAGACATGTTGAAGAATATGATGTAGAATTAATATTTCAATTGT
GTAAAGTGTCGCTGGAACCAGATATTCTTGCGCATCTCAATGTAATGGACCCTTCAATACTTGATAATTG
GCAATTGGCGTTCGTACCGCCGCCACCTCAGAGTATTGAGGACAATTATAGATATATAAGATCATTGGCT
ACTCGATGCCCTCCAGAGGATCCTGAAGCTGAAAATAAGGACCCTTATAAACAATACAGCTTTTGGCCTG
TTGATTTAACTGAACGGTTTTCAGCTGAATTAAGTCAATTTCCCCTGGGTCCTGAAGCTGAAAATAAGGA
CCCTTATAAACAATACAGCTTTTGGCCTGTTGATTTAACTGAACGGTTTTCAGCTGAATTAAGTCAATTT
CCCCTGGGAAGAAAATTTTTATTCCAAAGTGGATTATTCAGAACATATTCTACTACCTCAGGTACAAAGA
GATTGCGCAGCAGTATGGCCAGTAACACTACGCGTGCAAAACGCAGGCGTGTAAAATA
Protein Sequence
>YP_009163896.1 L1 [Human papillomavirus]
MTLWMQHSGKLYLPPAKPVAKVLNTDDYVVGTNLFFHASSERLLTVGHPYFEIPNQAIPGALAVPKVSGS
QYRVFRCLLPDPNKFALIEKSIYNPERERLVWKLKGLQLGRGGPLGVGTSGHPLFNKVLDTENPNAYPPE
QTDEQRQNVSMDPKQVQMLIVGCEPAMGEHWDVAKPCVGEQNNGDCPPIELVSSVIQDGDMCDTGFGAAN
FRRLQQDKSGVPLDIVDSICKWPDLIKMEQEVYGDKLFFFTKREQAYARHYFARAGDPGDAMPDGTVNQD
MFYYSPDRSQGALPQNKLASHIYFPTVSGSLVSSEAQLFNRPYWLQKAQGPNNGICWNNNLFLTVVDNTR
NTNFTISVYKNGASVPTPSQYSYKASDFKQYLRHVEEYDVELIFQLCKVSLEPDILAHLNVMDPSILDNW
QLAFVPPPPQSIEDNYRYIRSLATRCPPEDPEAENKDPYKQYSFWPVDLTERFSAELSQFPLGPEAENKD
PYKQYSFWPVDLTERFSAELSQFPLGRKFLFQSGLFRTYSTTSGTKRLRSSMASNTTRAKRRRVK
Molecule Role Protective antigen
Related Vaccines(s) HPV 16 L1-VLP Vaccine , Quadrivalent Human Papillomavirus (types 6, 11, 16, 18) Recombinant Vaccine , Recombinant Human Papillomavirus Nonavalent Vaccine
References