VIOLIN: Vaccine Investigation and Online Information Network

Porin
Gene Name	Porin
Sequence Strain (Species/Organism)	Yersinia pseudotuberculosis
NCBI Protein GI	WP_050103071
Other Database IDs	CDD:304382 CDD:290340 CDD:238208
Taxonomy ID	633
Protein Name	porin OmpF2
Protein pI	5.49
Protein Weight	39303.36
Protein Length	436
Protein Note	Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in strand and shear number. Classical (gram-negative) porins are non-specific channels for small hydrophillic molecules and form 16 beta-stranded barrels (16,20)...; cl21487
Protein Sequence	>WP_050103071.1 porin OmpF2 [Yersinia pseudotuberculosis] MKRNILAILIPTLLVATTSHAAEIYNKDGNKLDLYGKVKALHYFSDNTKSDGDKSYVRLGFKGVTQITDE LSGYGQWEYNFAANYAESQEAKDNKTRLAFAGLRYSNLGSIDYGRNYGVLYDIAAWTDMLPEFGNDSYTR TDNFMTGRTTGVATYRNTDFFGLVDGLKFSLQYQGKNGAEGETNNGRADTSKQNGDGFGLSSSYEIGAGV SVGAAYASSNRTLAQKNSTFGKGDKADAWTTGLKYSDNGVYLAATYAETRNMTPISGTAVINNVSTSVSG FANKTQNIELVAQYLFDFGLKPSIAYIQSKGKDIEGIGDTDLVKYVDIGATYYFNKNMSTYVDYKINQLN DDNKLKLNTDNVVALGLVYQF
Molecule Role	Protective antigen
Molecule Role Annotation	(Tsybul'ski? et al., 2011)
References