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YapF

Gene Name YapF
Sequence Strain (Species/Organism) Yersinia pestis CO92
VO ID VO_0011005
NCBI Gene ID 1173449
NCBI Protein GI 218927800
Locus Tag YPO0606
Genbank Accession CP009973
Protein Accession YP_002345675
Taxonomy ID 214092
Gene Starting Position 661724
Gene Ending Position 664009
Gene Strand (Orientation) -
Protein Name autotransporter protein
Protein pI 4.43
Protein Weight 74393.43
Protein Length 761
Protein Note Previously sequenced, Yersinia pestis putative autotransporter protein YapF TR:CAC14225 (EMBL: AJ277629). Similar to Acidovorax avenae subsp. avenae flagellin N1141-FLA1 TR:BAB16756 (EMBL: AB040139) (492 aa) fasta scores: E(): 0.0011, 20.8% id in 476 aa
DNA Sequence 
>NC_003143.1:661724-664009 Yersinia pestis CO92 chromosome, complete genome
TCTAGAACGCCCAGCCCAGATTTGCCCAGCCGGTGAAATCCTGACGATCACTATTGACCATGCCCGATAG
CTGTAGGCTGGCAGACACACCGTTATCGCTTACCAGTGCCATCCCCAGATCGAAGGTTCCTTGAGTGGTT
TTATCCTTGGTGCTTACGCCAACTACCGGCGAATTAGGGATACTCTGATCGATGGTGATCTCATCGCCAT
ACAACATTTGCTGGAATCCGACATTAAAGAACGGCTTAAGCAGTGTCTCGTTGGTCAGTGGATAGCGACC
ATCGAGACGTACTCCAGCATGGAGAGCGACTGCATGGTCGCTGTAGCTGCTATAGCGGGTGTCGATAAGA
TCATAGTTTTTGTTATTGGATGAGACAGTATAGCCATCGCGTTGCTGCCAGATATGCGTCAGCCCGACCA
TCGGTGTCATGGCATAGTTGCGATTCAACTGCCAGCTATTACCCACGGAGACATCGGTGTAGAGGCCACT
GCTATCATAGCTGCCGCTCTGGCTGCCCACGCCGTAGTAGGTATTGCTGTCACTGTAATCGGTGTCACTG
CTGAACCACGTACTGGTCGCTGCAATAAACAGACTCTCAGAGAGCTTCATTCCGCCCTGAACCCCCAGCA
TCAGCGTATTAATCTCCTCCTTACGCCCTACAGAGGTACCATTAAAATCGGTGCTGGCACTCTCATAACC
GCCGTGCCAGCCAAGCTGGAAATCGCCAAAATGTTGGTTCTGACCGAGCAATACCCCATAGCGCTGACCG
CTGTAACCGGAGGTCACTGGATCACGACGGTACTCACCAGCATAAGGTGTGATAAAGACGCAGCTATCGG
CACTCTCCAACTTCTGGTTACAACCGGCGTTACTTACCAGCTGACTATGCAGTTGCGAGGAGATGATATT
GGATGCCTGCTCCATGGAAGAACGCTGTGCCAATGCGGAGACTCCGGCATGAGAGACATCCGGTGCATAC
ACCAGTGCAGCAGATCCCAACGAACTACTGCTGCTACCGCTGTGAATCACCTTGATATCAGGCGTAATAC
CGTACAACCCCGCAATAGAACCCCCCACCGTACTCTGCTGGCCGGAGGTGGTATCGTAAGCCAGATTGTC
CAAGCTGTACTCTTTACCATAGGCGAAACCTTCACTGGCCTGCCCAGCCATCAGCACCAGATCGGCCCCT
TGCGTACCGTTACCCAGCACGATCGAACCGCCATTACTGACCGCCCACGGTGTCTCATTGCCCAAGGCGA
GTGTATAGCGTTCAATATTAACTACCGAACCGTCGGCCATCACTTCATAGGCTTGCTGTTGGCTTCCGCC
GGTGGCTGTCGCCAAAATTCTGCCGCTGGAGTTGATCGTGGCACTGCCGTTGAGCACATGAATACCATAG
GCGGATGCACCGCCCTGCGCACTCTCGCTAAATGCATCAACGATCAGTGTCCCGTTGTTGTAGATGTAGA
CCCCTTCGCCCTCGGTACTGATCGCGCTTGCGGTCGCATTGTTACCGCTGGCCGTGACTGACAACGAGCC
ATTGTTGCTCATCAGATGAGTGGGGTTAGCGGGGTTCCATGGATCGGGATCGACGCCTGGGTTGGCAGAG
AGGGTATGCAGGCCGGTTGCCCGTGCATCGCCAGCACTGGCATGAGCACTGACATCCAGACGGCCATTGT
TGACCACGCCATTACCGGCATTGGTATAGATACCGCTGGCAAAGGCGTCCTGCTCGGCCGTGGCACTCAC
CTGCATCACACCCTCGTTGCTCAACATCATGTGGTCACCGTAGTGATCCCCGGCGGCATCGGAAAAGGCC
AGGCCAGCCTGGATACCATAGACCTCTGCACTGCCGTGTAGGCTGTTGCTCGTGGCACGGATGCTACCCT
GATTACGCAGAGTGGACCAATAGGCATCCGTTGCCTGCAACCCGCTGGCAACAGCATGTTGATCCTGACT
GCTGGCACTCACGGTGATCGAGCCCTGAGCCTGATTAGTAAAGGTGCCGGAGGTGACCAGTACGCCATTC
GCCTGAGCGTCACCTTGAGTGGGTTCAACCCGCAGCGACAGTGCGCCTGCGTTGGTCGCATCCACTGCTT
GCCCTTCTGCGTTGGCGGTCAGATCTGCCAATGAAAAGTTATTGACCTCTGGTGCGGCGATCACAGTATG
ATCGCCCGTGTTATGCGGTTGCTGAGCGAAGTGGAGGGTCTGATCGGCATAGCTATTACCGCTAATCAGT
AAAGCAACAGCAACGGCGGATAAACGCCAGATCTTATGGTTATTCA
Protein Sequence 
>YP_002345675.1 autotransporter protein [Yersinia pestis CO92]
MNNHKIWRLSAVAVALLISGNSYADQTLHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNA
GALSLRVEPTQGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATS
NSLHGSAEVYGIQAGLAFSDAAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVS
AHASAGDARATGLHTLSANPGVDPDPWNPANPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGT
LIVDAFSESAQGGASAYGIHVLNGSATINSSGRILATATGGSQQQAYEVMADGSVVNIERYTLALGNETP
WAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQQSTVGGSIAGLYGITPDIKV
IHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKLESADSCVFIT
PYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM
KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIW
QQRDGYTVSSNNKNYDLIDTRYSSYSDHAVALHAGVRLDGRYPLTNETLLKPFFNVGFQQMLYGDEITID
QSIPNSPVVGVSTKDKTTQGTFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF
Molecule Role Protective antigen
Molecule Role Annotation Using a mouse model, YPO0606 (yapF) partially protected mice from infection with Y. pestis at a high challenge dosage (200x LD(50)) (Li et al., 2009).
References