VIOLIN Logo
VO Banner
Search: for Help
About
Introduction
Statistics
VIOLIN News
Your VIOLIN
Register or Login
Submission
Tutorial
Vaccine & Components
Vaxquery
Vaxgen
VBLAST
Protegen
VirmugenDB
DNAVaxDB
CanVaxKB
Vaxjo
Vaxvec
Vevax
Huvax
Cov19VaxKB
Host Responses
VaximmutorDB
VIGET
Vaxafe
Vaxar
Vaxism
Vaccine Literature
VO-SciMiner
Litesearch
Vaxmesh
Vaxlert
Vaccine Design
Vaxign2
Vaxign
Community Efforts
Vaccine Ontology
ICoVax 2012
ICoVax 2013
Advisory Committee
Vaccine Society
Vaxperts
VaxPub
VaxCom
VaxLaw
VaxMedia
VaxMeet
VaxFund
VaxCareer
Data Exchange
V-Utilities
VIOLINML
Help & Documents
Publications
Documents
FAQs
Links
Acknowledgements
Disclaimer
Contact Us
UM Logo

YopO

Gene Name YopO
Sequence Strain (Species/Organism) Yersinia pestis Angola
VO ID VO_0011003
NCBI Gene ID 5798322
NCBI Protein GI 162417777
Locus Tag YpAngola_B0072
Genbank Accession CP000902
Protein Accession YP_001604502
Taxonomy ID 349746
Plasmid No new_pCD
Gene Starting Position 49111
Gene Ending Position 51300
Gene Strand (Orientation) -
Protein Name protein kinase YopO
Protein pI 6.71
Protein Weight 77377.02
Protein Length 729
Protein Note alternate gene symbol ypkA; identified by similarity to SP:Q9RI12; match to protein family HMM PF00069
DNA Sequence
>NC_010157.1:49111-51300 Yersinia pestis Angola plasmid new_pCD, complete sequence
GTCACATCCATTCCCGCTCCAACCGGTTCAGTCGCTCGGCGATGGTCGTCAGCTCTCGCAACTTTTCTCT
CTGTTCAACCAAATGCTCATCCATTAAACTGCTTCGTCCAAGTTGAATCAGTAGTGGAATAGAGTCCACT
GTAAAGTTTCGCATATCATCAGTAAACTCCGATACCTCCTGTAGCGTAATAGCTGCATGGGCCGCCATCA
TCTGACGGTGAATTGCGGTATACTGCTCAGTGCCGAATTTCACTACAGGCCGGGTACTGTCAAAACGCTG
CAGGGACTGACGAGCAACATCGGCCCAAGAACCTGAACGATTAATCAGAATAGATAATTGCGCTTTCGCA
CTCTCCTGCTGCTGCTGGAGAGTATTCAATTGCTGCGACAAGGTGATCTTAGCCTCAGTTAATCGATTCA
GGAAGCCGTAGGTTTCAGAGGACACGGGCTGCCCTTGCTGTGACAAGGTGACTAAGACCTCTAAAAGCGT
TTCCAGGTGCTTATGTGCGCGCACTAGTGAACCGATATCAGAAAAAGAGTGTGTCTGGTCCAGATGCTTC
TGGATCCTCTGCAGTGAAGGTTCGACGATCGATAGCATAAAGTTACTGCGATGATAGGGGGATACTTCCG
TACTGGAATTCTTGGTATCCCCTTCTCTGCCTTTGACATAGTCTTCAATCACTCTGTAAGTCTTCAGAAT
CAAACTGTTAAAACTCTTCAACTGATCCTTGTCTACTCCCCCCTCGCGTTCGGCCTTGTCGAGTGCCACC
AACATGGTATCAAGATCCGACAAAACCCCCCCCATATCCAATTGCTTAGTTGCTGCACTGCTCAAATGCG
TCCTAAGCAAATCAGATAGCTCCCGAAGCTTCTTGGGTGTTATCCGCCTTACATCAGTAGATAATGGGCT
CATTTCTCCGGTTAGGGTATCTTTTAGGATCTGCTTGGCCGACTCCTCGTCGATAGTTCCGTCGCTCAAG
AACTCGTGGAGTCTGGCTTCGTTGGAATCAGGTCTTGAGTCAGCGGAAACGCCAAGGATGTCTGTGATGA
AGCGTGTATAGGCTGTCTCGACTCCAGCTATACCAGGTCGATGGATTGGATAACCATTCTCATCCATTAC
GTGCGCTGGTTCTGAGGTAATGAATCTCAGTCCTTGATTAGGCTTTATCTCCGGATTTTTCTCAAAACCT
TCGATACAATGTAGAAGGGTTGACACTACGAGAAAAACATCGCTCTTTTCTGATGCGCCTAGGTTTCCTA
CTCCAAGCTCCGGCGCTTTGAAGGATTCTGTAAACCCCTTAGGTTGTTCCCCTGAACGAGAGTGTAATCC
TAGATCAATAACAACGGGCTCTCCGCTAGCGCGGTCAAATACCACATTACCGGGTTTGATATCGTTATGT
ACTACCCCTGCCTTGGCAAGGTGATTGGTTACATCTAATAGCCGATGGGCAATAAACTTGATCGTTCCCC
AGTAGGCTTCACTATTGATCTTTCCTTGCTTCCAGCTATCGGCGAGGGTTCTTAGTGTGTCAGAACAACG
CCAACCATCCACCTCATCCATCAGCAATGCTTCCTCCTTACGGTTACCGTATGGCACCACAGCCATGCCA
TGAACATTGGCAAGATTAGGATGTTTGCCCGCGGTTTTATAGATGTGTTTATAAGCCTCCAGTTCTGCGA
ACAAATGCCCCTCGGCAATGGAGCGTTCAATCTTAGCTACCAACCGCTGCTTATCCTTAGTTTCTATTAT
ACTAATATGGCTTTCGCCCTCGGCAAACTTATCGGTTTCAGCCACTCGCATCCCTTCAAGATCCGGAGCT
CCTGATAAGGGCTCCCCTTTCCAACCCAGCGGCAGTTCGGTCTGTGGCTTGGCTCCAAAGAGATTACTGA
GAGCATTGGGGATATCAGACCTTAGCTCCTGCGAAGTCGTTTTCTGGGCCGCATGGAGTGTGTCAGTAAG
GTTACGAGCAATTGAAAAGTTAAACATCTTCCCCGAAAAGATCTTACCAACCCCTTCTCGAAAGAGAGAA
AAACCACTGTGGGGGTTCAAGCGCAACACTTGATTATCGATAATTCTATACCGTTTTCCTCCGATATTGA
GCTCACCGACAGGATTTTGCCAATGTTGGCTGATGCGCTCATGAGCTTTGGCGAGGGAGATCGACGGTGG
CATAGTTCCCATGATTTTCA

Protein Sequence
>YP_001604502.1 protein kinase YopO (plasmid) [Yersinia pestis Angola]
MKIMGTMPPSISLAKAHERISQHWQNPVGELNIGGKRYRIIDNQVLRLNPHSGFSLFREGVGKIFSGKMF
NFSIARNLTDTLHAAQKTTSQELRSDIPNALSNLFGAKPQTELPLGWKGEPLSGAPDLEGMRVAETDKFA
EGESHISIIETKDKQRLVAKIERSIAEGHLFAELEAYKHIYKTAGKHPNLANVHGMAVVPYGNRKEEALL
MDEVDGWRCSDTLRTLADSWKQGKINSEAYWGTIKFIAHRLLDVTNHLAKAGVVHNDIKPGNVVFDRASG
EPVVIDLGLHSRSGEQPKGFTESFKAPELGVGNLGASEKSDVFLVVSTLLHCIEGFEKNPEIKPNQGLRF
ITSEPAHVMDENGYPIHRPGIAGVETAYTRFITDILGVSADSRPDSNEARLHEFLSDGTIDEESAKQILK
DTLTGEMSPLSTDVRRITPKKLRELSDLLRTHLSSAATKQLDMGGVLSDLDTMLVALDKAEREGGVDKDQ
LKSFNSLILKTYRVIEDYVKGREGDTKNSSTEVSPYHRSNFMLSIVEPSLQRIQKHLDQTHSFSDIGSLV
RAHKHLETLLEVLVTLSQQGQPVSSETYGFLNRLTEAKITLSQQLNTLQQQQESAKAQLSILINRSGSWA
DVARQSLQRFDSTRPVVKFGTEQYTAIHRQMMAAHAAITLQEVSEFTDDMRNFTVDSIPLLIQLGRSSLM
DEHLVEQREKLRELTTIAERLNRLEREWM

Molecule Role Protective antigen
Molecule Role Annotation Modified yopO antigens were able to partially protect immunized mice at various levels against lethal challenge with Y. pestis KIM 1001 strain (Wang et al., 2008).
References