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HIV complete genome

Gene Name HIV complete genome
Sequence Strain (Species/Organism) Human immunodeficiency virus 1
NCBI Nucleotide GI 388332048
NCBI Protein GI 388332049
Protein Accession AFK29870.1
Taxonomy ID 11676
Gene Strand (Orientation) ?
Protein Name gag protein
Protein Note subtype: B
DNA Sequence
>gi|388332048|gb|JN860769.1| HIV-1 isolate MERLBDTRC10 from Thailand, complete genome
GATGGGTGCGAGAGCGTCAGTATTAAGCGGCGGAAAATTAGATCAATGGGAAAAAATTCGGTTAAGACCA
GGAGGAAAGAAAAAATATAAATTAAAACATATAGTATGGGCAAGCAGGGAGCTAGAAAGATTTGCAGTTA
ATCCTGGCCTTTTAGAAACAGCAGAAGGCTGTAGACAAATACTGGGACAGCTACAGCCATCCCTTCAGAC
AGGGTCAGAAGAACTTAAATCATTATTTAATACAGTGGCAACCCTCTATTGTGTGCATCAAAGGATAGAG
ATAAAAGACACCAAAGAAGCTCTAGACAGGATAGAGGAAGAACAAAATAAAAGTAAGCAAAAAGCACAGC
CAGCGGCAGCTGACACAGGAAACAACAGCCAGGTCAGCCAAAATTACCCTATAGTACAGAACCTGCAGGG
GCAAATGGTACATCAGCCCATATCACCTAGAACTCTAAATGCATGGGTGAAAGTAGTAGAAGAGAAGGCT
TTCAGCCCAGAAGTAATACCCATGTTTTCAGCYTTATCAGAAGGAGCCACCCCACAAGATTTAAACACCA
TGCTAAACACAGTGGGGGGACATCAAGCAGCCATGCAAATGTTAAAAGAGACTATAAATGAAGAAGCTGC
AGAATGGGATAGAGTGCATCCAGTACATGCAGGGCCTATTGCACCAGGCCAGATGAGGGAACCAAGGGGA
AGTGACATAGCAGGAACCACTAGCACCCTTCAGGAACAAATAGCATGGATGACAAATAATCCACCTATCC
CAGTAGGAGACATCTATAAAAGATGGATAATCCTGGGGCTAAATAAAATAGTAAGAATGTACAGCCCTAC
TAGCATTCTGGACATAAAACAAGGACCAAAAGAGCCCTTTAGAGATTATGTAGATCGGTTCTATAGAACC
CTAAGAGCCGAGCAAGCTTCACAGGATGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAAAATTCGA
ACCCAGATTGTAAAACTATTTTAAAAGCATTGGGACCAGCAGCTACACTAGAAGAAATGATGACAGCATG
TCAAGGAGTGGGGGGACCCAGCCATAAAGCAAGAGTCTTGGCTGAAGCAATGAGCCAAGCAACAAATTCA
GCTGCTGCCATAATGATGCAGAGAAACAATTTTAAGCAGAGAGGCAATTTTAAGGGCCAAAGGAGAGTCG
TTAAATGTTTCAACTGTGGCAAGGAAGGGCACATAGCCAAAAATTGCAGGGCCCCTAGAAAAAAGGGTTG
TTGGAAATGTGGACAGGAAGGACACCAAATGAAAGATTGTACTGAGAGACAGGCTAATTTTTTAGGGAAA
ATCTGGCCCTCCCACAAGGGAAGGCCAGGAAACTTTCTTCAGAACAGACCAGAGCCAACAGCCCCTCCAG
AAGAGAGCTTCAGGTTTGGGGAAGAGACAACAACTCCCCCTCAGAAACAGGAACCAATAGACAAGGAACT
ATATCCCTTAGCTTCCCTCAGATCACTCTTTGGCAACGACCCCTTGTCGCAATAAAGATAGGGGGGCAGT
TAAGGGAAGCTCTATTAGACACAGGAGCAGATGATACAGTATTAGAAGAAATGAATTTACCAGGAAAATG
GAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGGCAATATGAGCAAATACCTATAGAA
ATCTGTGGACATAAAGCTATAGGTACAGTATTAATAGGACCTACACCTGTAAACATAATTGGAAGAAATT
TGTTGACTCAGCTTGGTTGCACTCTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAA
GCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAA
ATTTGTACAGAAATGGAAAAGGAAGGAAAGATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAA
TATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTCAATAAGAG
AACTCAAGACTTCTGGGAAGTTCAATTAGGAATACCACATCCTGCAGGGTTAAAACAGAAAAAATCAGTA
ACAGTACTGGATGTGGGTGATGCATACTTCTCAGTTCCTTTGGATAAAGAATTCAGGAAGTATACTGCAT
TTACCATACCTAGTGTAAACAATGAGACACCAGGGGTTAGATATCAGTACAATGTGCTTCCACAGGGATG
GAAAGGATCACCAGCAATATTTCAAAGTAGCATGACAAGAATTTTAGAGCCTTTTAGAAAACAAAATCCA
GACATAGTTATCTATCAATACATGGATGATCTGTATGTAGGGTCTGACTTAGAAATAGAGCAGCATAGAA
CAAAAATAGAGGAGCTGAGACAACATCTGTTGAGGTGGGGATTTACCACACCAGACAAAAAACATCAGAA
GGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAAGGTTG
CCAGAAAAAGACAGCTGGACTGTCAATGATATACAAAAGTTAGTGGGAAAATTGAATTGGGCAAGCCAGA
TTTATCCAGGGATTAAAATAAAGCAATTATGTAAACTCCTTAGGGGAACCAAAGCACTAACAGAAATAGT
ATCACTAACAGAAGAAGCAGAGTTAGAACTAGCAGAAAACAGGGAGATTCTAAGAGAACCAGTACATGGA
GTGTATTATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAGCAGGGGCAAGGCCAATGGACATATC
AAATTTATCAAGAGCCATTTAAAAACCTGAAAACAGGAAAGTACGCAAGAATGAGGGGCACCCATACTAA
TGATGTAAAACAATTAACCGAGGCAGTACAAAAAATAGCCACAGAAAGCATAGTAATATGGGGAAAGACC
CCCAAATTTAAACTACCCATACAAAAAGAAGCATGGGAAGCATGGTGGACAGATTATTGGCAAGCCACCT
GGATCCCTGAATGGGAGTTTGTCAATACCCCTCCTTTAGTGAAATTATGGTACCAGTTAGAGAAAGAACC
CATAGAAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAATAGGGAGACTAAAATAGGAAAAGCAGGA
TATGTTACTAACAAAGGAAGACAAAAAGTTGTCACCCTACCTGACACAACAAATCAGAAGACTGAGTTAC
AAGCAATTAATCTAGCTTTACAAGATTCTGGATTAGAAGTAAACATAGTAACAGACTCACAATATGCATT
AGGAATCATTCAAGCACAACCAGATAAGAGTGAATCAGAGTTAGTCAGTCAAATAATAGAGCAGTTAATA
AAAAAGGAAAAAGTCTACCTGGCATGGGTGCCAGCACACAAAGGAATTGGAGGAAATGAACAAATAGATA
AATTAGTTAGTGCTGGAATCAGGAAAGTACTATTTTTAGATGGAATAGATAAGGCCCAAGAAGAACATGA
GAAATATCACAATAACTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTATAGTAGCAAAAGAAATA
GTAGCCAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCATGCATGGACAAGTAGACTGTAGTCCAGGAA
TATGGCAACTAGACTGTACCCATTTAGAAGGAAAAATTATCCTGGTGGCAGTACATGTGGCCAGTGGCTA
TATAGAAGCAGAAGTTATTCCAGCAGAAACAGGACAGGAAACAGCATACTTTCTCTTAAAGTTAGCAGGA
AGATGGCCAGTAAAAACAATACATACAGACAATGGCAGCAATTTCACCAGTAATACGGTTAAGGCCGCCT
GTTGGTGGGCGGGGATCAAGCAGGAATTTGGCATTCCCTACAATCCCCAAAGCCAAGGAGTAGTAGAATC
TATGAATAAAGAATTAAAGAAAATTATAGAACAGGTAAGAGATCAAGCTGAACATCTTAAGACAGCAGTA
CAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAA
TAGTAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACATATTACAAAAATGCAAAATTT
TCGGGTTTATTACAGGGACAACAGAGATCCACTTTGGAAAGGACCAGCAAAGCTCCTTTGGAAAGGTGAA
GGGGCAGTAGTAATACAAGAAAATAGTGACATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGG
ATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAACACCTGGAAAA
GTTTGGTAAAATACCATATGCATGTTTCAAAGAAAGCTAGGGGATGGTTTTATAGACATCACTATGAAAG
CACTCACCCTAGAATAAGTTCAGAAGTACACATCCCACTAGGGGATGCTGAATTGGTAGTAATAACATAT
TGGGGTCTAAATACAGGAGAAAGAGAGTGGCATTTAGGTCAAGGAGCCTCCATAGAATGGAGAAAAAAGA
GGTACAGCACACAAGTAGACCCTAATGTAGCAGACCAACTAATTCATCTGTATTACTTTGATTGTTTTTC
AGAATCTGCTATAAGAAAGGCCATATTAGGAAGTAGAGTTAGACCTAGGTGTGAATATCAAGCAGGACAT
AACAAGGTAGGATCTCTACAGTACTTGGCACTAACAGCATTACTAACACCAAAAAAGATAAAGCCACCTT
TGCCTAGTGTTAGGAAACTGACAGAGGATAGATGGAACAAGCCCCGGAAGACCAAGGGCCACAGAGGGAG
CCAAACAACGAATGGACATTAGAGCTTTTAGAGGAACTGAAGAGTGAAGCAGTTAGACACTTCCCTAGGC
CATGGCTCCATAGCTTAGGACAATATATCTATAGAACTTATGGAGATACTTGGACGGGAGTGGAAGCTCT
AATAAGAATGCTGCAACAACTGCTGTTTATTCATTTCAGAATTGGGTGTCAACATAGCAGAATAGGCATT
ACTCCAACGAGAAGAGCAAGAAATGGAGCCAGTAGATCCTAGACTAGAGCCCTGGAAGCATCCAGGAAGT
CAGCCTAGGACTACTTGTACCAATTGTTATTGTAAAAAGTGCTGCTTTCATTGCCAAGTTTGCTTCATAA
AAAAAGGCTTAGGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGACGAGGACCTCCTCAAGACAGTCA
GACTCATCAAGCTTCTCTATCAAAGCAGTAAGTAGTAAATGTGATGCAAGCTTTATACATTTTAGCAATA
GTAGCTTTAGTAATAGCAGCAATAATAGCAATAGTTGTATGGACCATAGTAATTATAGAATATAGGAAAA
TATTAAGACAGAAAAAAATAGATAGATTAATTGATAGAATAAGAGAAAGAGCAGAAGACAGTGGCAATGA
AAGCGAAGGGGATCAGGAAGAATTATCAGCACTTGTGGTGGAAATGGGGCACGATGCTCCTTGGGATGTT
GATGATCTGTAGTGCAACAAAACAATTGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGAAAGATGCA
TCCACCACTCTATTTTGTGCATCAGATGCTAAAGCATATGATACAGAGGCACATAATGTTTGGGCCACGC
ATGCCTGTGTACCCACAGACCCTAACCCACAAGAAATAGCATTGGGAAATGTGACAGAAAAGTTTAACAT
GTGGGAAAATAACATGGTAGATCAGATGCATGAGGATATAATCAGTTTATGGGATCAAAGCCTAAAGCCA
TGTGTAAGATTAACCCCACTCTGTGTCACTTTAAATTGCACTGATGTGTGGAGAAATACTACTAATACTA
CTAGTGGTGGGGAGGAAGTGATGGAGAGCGGAGAAATAAAAAACTGCTCTTTCAATATCACCACAAGCAC
AAAAGATAAGAAGAACACATATGCACTTTTTTATAAACTTGATGTAACACCAATGGATAATGAAGTATCA
AGAAATAATATTACAAATGATACCAATTATAGTAGGTATAGGTTGTTAAATTGTAACACCTCAGTCATTA
CACAGGCCTGTCCAAAGGTATCCTTTGAACCAATTCCTATACATTATTGCACCCCGGCTGGTTTTGCGAT
TATACAGTGTAATGATAAGAAGTTCAATGGAACAGGACCATGTAAAAATGTCAGCACAGTACAATGTACA
CATGGAATTAGACCAGTAGTGTCAACTCAACTGCTGTTAAATGGCAGTCTAGCAGAAGAGGAGATAGTAA
TTAGATCTAAAAATTTTACAAACAATGCTAACACCATAATAGTACAGCTGAATAAATCTGTAACAATTGA
TTGTATAAGACCCAACAACAATACAAGGAAAAGTATACATATGGGGCCAGGGAAAGCATTTTATACAACA
GGAGACATAATAGGAGATATAAGAAAAGCACATTGCAGCATTAATAGAACAGATTGGGAAAACACTTTAA
AACAGGTAGCTAACAAATTAATGGAACAATTTGGGAATAAAACAATAGTCTTTAAGAACTCCTCAGGAGG
GGACCCAGAAATTACAACACACAGTTTTAATTGTGGAGGGGAATTTTTCTACTGTAATACATCAGCACTG
TTTAATCATACGTTTAATAATACTGAAGGCGAAAATATAACTGAAAGCATAAATACAACAATTATCAAGC
TCCCATGCAGAATAAAACAAATTATAAACATGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCAT
CAGTGGACAAATTAGCTGTTCATCAAATATTACAGGAATACTATTAACAAGAGATGGTGGTGGTAATAAT
ACGGGAAATGAGACCTTCAGACCTGGGGGAGGAAATATGAAAGACAATTGGAGAAGTGAATTATATAAAT
ATAAAGTAGTAAAAATTGAGCCATTAGGAATAGCACCCACCAAGGCAAAGAGAAGAGTGGTGCAGAGAGA
AAAAAGAGCAGTGGGAGTGATAGGAGCTATGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGC
GCAGCGTCACTGACGCTGACGGTACAGGCCAGACAATTGTTGTCTGGTATAGTGCAACAGCAGAACAATT
TGCTGAGAGCTATTGAGGCGCAACAGCATCTGTTGCAACTCACAGTCTGGGGCATCAAGCAGCTCCAGGC
AAGAGTCCTGGCTGTGGAGAGATACCTAAAGGACCAACAGCTCCTAGGGATTTGGGGTTGCTCTGGAAAA
CTCATTTGCACCACTGCTGTACCTTGGAATGATAGTTGGAGTAATAAATCTCTGACTGAGATTTGGAATA
ACATGACCTGGATGGAGTGGGAAAGAGAAATTAACAATTATACAGGCATAATATACTCCTTAATTGAGGA
ATCGCAGAACCAGCGGGAAAAGAATGAACTAGAATTATTGGAATTGGATAAGTGGGCAAGTTTGTGGAAT
TGGTTTGACATAACAAAATGGCTGTGGTATATAAAAATATTCATAATGATAGTAGGAGGCTTGGTAGGTT
TAAGAATAGTTTTTGCTGTACTTTCTATAGTAAATAGAGTTAGGCAGGGATACTCACCATTGTCATTACA
GACCCGCTTCCCAGCCCCGAGGGGACCCGGAGGGCCCGAAGGAATCGAAGAAGAAGGTGGAGAGAGAGAC
AGAGACAGATCCGGGACATTAGTGAACGGATTCTTGACACTTATCTGGGACGACCTCCAGAACCTGTGCC
TCTTCAGTTACCGCCGATTGAGAGACTTACTCTTGATTGTAGTGAGGATTGTGGAACTTCTGGGACGCAG
GGGGTGGGAGGCCCTCAAGTATTGGTGGAACCTCCTGCAGTATTGGGGTCAGGAACTAAAGAATAGTGCT
GTTAGCTTGCTCAATGTCACAGCCATAGCAGTAGCTGAGGGGACAGATAGGGTTATAGAAGTAGTACAAA
GAGCCTATAGAGCTATTATCCACATACCTAGAAGAATAAGACAGGGCTTAGAAAGGACTTTAGTATAAAA
TAAAAATAAGACAGGGCTTAGAAAGGACTTTAGTATAAAATGGGTGGCAAGTGGTCAAAAAGTAGTCTGG
TTGGATGGCCTGCTATAAGGGAAAGAATGAAACGAGCTGAGCCAGCAGCAGATGGGGTGGGAGCAGTATC
TCGAGACCTGGAAAGACATGGAGCAATCACAAATAACAATACACCAGCTAATAATGCTGATTGTGCCTGG
CTGGAAGCACAAGAAGAGGAGGAGGAGGTGGGTTTTCCAGTCAAACCCCAGGTACCTTTAAGGCCAATGA
CTTACAAGGGAGCTCTGGATCTGAGCCACTTTTTAAGAGAAAAGGGGGGACTGGAAGGGTTAGTTTACTC
CCAGAAAAGACAAGACATTCTTGATCTGTGGATCTATCACACACAAGGCTTCTTCCCTGACTGGCAGAAC
TACACACCAGGGCCAGGGACCAGATTTCCACTGACCTTTGGATGGTGCTTCAAGCTAGTACCAGTAGAGC
CAGAGGAGGTAGAAAAGGCCAATGAAGGGGAGAATAACTGCTTGTTGCATCCTATGAGCCAACATGGAAT
GGAAGACCCGGAGAGAGAAGTGTTAAAGTGGAAGTTTGACAGCAGCCTAGCATATCATCACAGGGCCCGA
GAGCTGCATCCGGAGTTCTACAAAGACTGCTGACACCGAGCTTTCTACAAGGGACTTTCCGCTGGGGACT
TTCCAGGGGAGGTGTGGCCTGGGCGGGACCGGGGAGTGGCGAG
Molecule Role Other
References