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N gene

Gene Name N gene
Sequence Strain (Species/Organism) Infectious hematopoietic necrosis virus
NCBI Gene ID 1489845
NCBI Protein GI 9628083
Locus Tag IHNVgp1
Genbank Accession L40883
Protein Accession NP_042676
Taxonomy ID 11290
Gene Starting Position 174
Gene Ending Position 1349
Gene Strand (Orientation) ?
Protein Name nucleocapsid protein
Protein pI 4.56
Protein Weight 39826.36
Protein Length 391
DNA Sequence 
>gi|9628082:174-1349 Infectious hematopoietic necrosis virus, complete genome
GATGACAAGCGCACTCAGAGAGACGTTCACTGGACTCAGAGACATCAAGGGGGGAGTCCTCGAGGATCCA
GAGACGGAGTATCGTCCCAGTACGATAACCCTCCCTCTATTTTTCTCCAAGACAGACTTAGACCTAGAGA
TGATCAAGCGGGCGGTGAGTCAAGTCGGAGGAGAGGGAACGAGAAAGGCATTGAGCCTCCTGTGCGCGTT
CGTCATTGCAGAGACGGTCCCATCGGAGGCAGGTACGGTCGCCGAACTTCTGGAAGCCCTGGGTTTCGTG
CTGGAGTCTTTGGACACTGGGGCACCACCAGACGCTACCTTCGCAGATCCCAACAACAAGCTTGCAGAAA
CGATCGTAAAGGAAAATGTCCTTGAGGTTGTGACCGGCCTCCTCTTCACCTGCGCCCTACTGACTAAGTA
TGATGTGGACAAGATGGCCACATACTGCCAAAACAAGCTCGAGCGTCTTGCAACCAGCCAAGGGATTGGC
GAGTTGGTTAACTTCAACGCCAACAGGGGAGTCCTGGCCAAGATCGGGGCGGTGCTTAGACCCGGACAGA
AGCTCACCAAGGCTATCTATGGGATCATTCTCATCAACCTGTCCGACCCAGCCATCGCTGCCAGAGCCAA
GGCACTGTGCGCCATGAGACTGAGCGGGACAGGAATGACAATGGTGGGGCTGTTCAACCAAGCCGCAAAG
AACCTGGGCGCCCTTCCAGCCGACCTTTTAGAGGATCTGTGCATGAAGTCAGTGGTGGAGTCCGCCAGAC
GCATTGTCAGACTGATGAGGATCGTAGCAGAGGCCCCAGGGGTAGCAGCAAAGTACGGTGTCATGATGAG
CAGGATGCTCGGGGAGGGGTACTTCAAGGCCTACGGGATCAACGAGAACGCCAGGATCACCTGCATTCTC
ATGAACATCAACGATAGGTATGACGATGGGACCTCGAGAGGACTGACAGGGATAAAGGTCTCCGACCCTT
TCAGGAAGCTGGCGAGGGAGATCGCTCGTCTCCTTGTCCTCAAGTACGATGGCGATGGCTCAACCGGAGA
GGGGGCGTCAGAGCTGATCCGCCGGGCGGAGATGGCATCTCGGGGACCAGACATGGGTGAGGAGGAGGAG
GAGGACGAGGAGGACGACGACTCCAGTGAGCCAGGAGACTCCGACTCATTCCACTG
Protein Sequence 
>gi|9628083|ref|NP_042676.1| nucleocapsid protein [Infectious hematopoietic necrosis virus]
MTSALRETFTGLRDIKGGVLEDPETEYRPSTITLPLFFSKTDLDLEMIKRAVSQVGGEGTRKALSLLCAF
VIAETVPSEAGTVAELLEALGFVLESLDTGAPPDATFADPNNKLAETIVKENVLEVVTGLLFTCALLTKY
DVDKMATYCQNKLERLATSQGIGELVNFNANRGVLAKIGAVLRPGQKLTKAIYGIILINLSDPAIAARAK
ALCAMRLSGTGMTMVGLFNQAAKNLGALPADLLEDLCMKSVVESARRIVRLMRIVAEAPGVAAKYGVMMS
RMLGEGYFKAYGINENARITCILMNINDRYDDGTSRGLTGIKVSDPFRKLAREIARLLVLKYDGDGSTGE
GASELIRRAEMASRGPDMGEEEEEDEEDDDSSEPGDSDSFH
Molecule Role Other
Related Vaccines(s) IHNV DNA vaccine pCMV4-N encoding the nucleoprotein
References