spike protein
General Information
Protegen ID
4304
Sequence Strain (Species/Organism)
Transmissible gastroenteritis virus
Taxonomy ID
11149
Other Database IDs
CDD:279880
Molecule Role
Protective antigen
Molecule Role Annotation
(Mou et al. , 2016 )
References
Mou et al. , 2016: Mou C, Zhu L, Xing X, Lin J, Yang Q. Immune responses induced by recombinant Bacillus subtilis expressing the spike protein of transmissible gastroenteritis virus in pigs. Antiviral research . 2016; 131; 74-84. [PubMed: 26988122 ].
Gene Information
Gene Name
spike protein
Protein Information
Protein Name
spike protein
NCBI Protein GI
AAF02707
Protein pI
6.48
Protein Weight
31348.22
Protein Length
378
Protein Note
S
Protein Sequence
>AAF02707.1 spike protein, partial [Transmissible gastroenteritis virus]
MKILFVVLVIMPLIYGDNFPCSKLTNRTIGKHWNLIDTFLINYSSRLPPNSDVVLGDYFPTVQPWFNCIP
NDSNDLYVTLENLKALYWDYATENITSNHRQRLNVVVNGYPYSITVTTTRNFNSAEGAIICICKGSPPTT
TTESSLTCNWGSECRLNHKFPICPSNSEANCGNMLYGLQWFADVVVAYLHGASYRISFENQWSGTVTLGD
MRATTSQTAGTLVDLWWFNPVYDVSYYRVNNKNGTTVVSNCTDQCASYVANVFVTQPGGFIPSDFSFNNW
FLLTNSSTLVSGKLVTKQP
Epitope Information
IEDB Linear Epitope
-- Assay Type --
T Cell Epitope
B Cell Epitope
IEDB ID
Epitope
MHC restriction
Starting position
Ending position
IEDB ID
Epitope
Starting position
Ending position
70133
VNNKN
239
244
174554
ICPSNSEAN
162
171
174690
PPNSDV
48
54
MKILFVVLVIMPLIYGDNFPCSKLTNRTIGKHWNLIDTFLINYSSRLPPNSDVVLGDYFPTVQPWFNCIPNDSNDLYVTLENLKALYWDYATENITSNHRQRLNVVVNGYPYSITVTTTRNFNSAEGAIICICKGSPPTTTTESSLTCNWGSECRLNHKFPICPSNSEANCGNMLYGLQWFADVVVAYLHGASYRISFENQWSGTVTLGDMRATTSQTAGTLVDLWWFNPVYDVSYYRVNNKNGTTVVSNCTDQCASYVANVFVTQPGGFIPSDFSFNNWFLLTNSSTLVSGKLVTKQP