VP2
General Information
Protegen ID
4298
Sequence Strain (Species/Organism)
Porcine rotavirus
Taxonomy ID
10913
Other Database IDs
CDD:282884
Molecule Role
Protective antigen
Molecule Role Annotation
(Wen et al. , 2015 )
References
Wen et al. , 2015: Wen X, Wei X, Ran X, Ni H, Cao S, Zhang Y. Immunogenicity of porcine P[6], P[7]-specific △VP8* rotavirus subunit vaccines with a tetanus toxoid universal T cell epitope. Vaccine . 2015; 33(36); 4533-4539. [PubMed: 26192360 ].
Gene Information
Gene Name
VP2
Protein Information
Protein Name
VP2 protein
NCBI Protein GI
AJC68690
Protein pI
5.56
Protein Weight
98671.47
Protein Length
948
Protein Note
Rotavirus VP2 protein; pfam05087
Protein Sequence
>AJC68690.1 VP2 protein [Porcine rotavirus]
MAYRKRGAKRENLPQQNERLQEKEIEKNIDASMESKANNKKQQLSDKVLSQKEEIITDAQDDVKIADEVK
KSSKEESKQLLEILKTKEDHQKEVQYEILQKTIPTFEPKESILKKLEDMKPEQAKKQTKLFRIFEPKQLP
IYRANGERELRNRWYWKLKRDTLPDGDYDVREYFLNLYDQILIEMPDYLLLKDMAVENKNSRDAGKVVDS
ETASICDAIFQDEETEGVIRRFIADMRQQVQADRNVVNYPSILHPIDHAFNEYFLNHQLVEPLNNEIIFN
YIPERIRNDVNYILNMDMNLPSTARYIRPNLLQDRLNLHDNFESLWDTITTSNYILARSVVPDLKEKELV
STEAQIQKMSQDLQLEALTIQSETQFLAGINSQAANDCFKTLIAAMLSQRTMSLEFVTTNYMSLISGMWL
LTVIPNDMFLRESLVACELAIINTIVYPAFGMQRMHYRNGDPQTPFQIAEQQIQNFQVANWLHFINNNRF
RQVVIDGVLNQTLNDNIRNGQVINQLMDALMQLSRQQFPTMPVDYKRSIQRGILLLSNRLGQLVDLTRLL
SYNYEILMACITMNMQHVQTLTTEKLQLTSVTSLCMLIGNTTVIPSPQTLFHYYNVNVNFHSNYNERIND
AVAIITAANRLNLYQKKMKSIVEEFLKRLQIFDVPRVPDDQMYRLRDRLRLLPVERRRLDIFNLILMNME
QIERASDKIAQGVIIAYRDMQLERDEMYGYVNIARNLDGYQQINLEELMRTGDYGQITNMLLNNQPVALV
GALPFVTDSSVISLIAKLDATVFAQIVKLRKVDTLKPILYKINSDSNDFYLVANYDWIPTSTTKVYKQVP
QPFDFRASMHMLTSNLTFTVYSDLLAFVSADTVEPINAVAFDNMRIMNEL
Epitope Information
IEDB Linear Epitope
-- Assay Type --
T Cell Epitope
B Cell Epitope
IEDB ID
Epitope
MHC restriction
Starting position
Ending position
187706 SLISGMWLL
HLA-A*02:01 413
422
IEDB ID
Epitope
Starting position
Ending position
MAYRKRGAKRENLPQQNERLQEKEIEKNIDASMESKANNKKQQLSDKVLSQKEEIITDAQDDVKIADEVKKSSKEESKQLLEILKTKEDHQKEVQYEILQKTIPTFEPKESILKKLEDMKPEQAKKQTKLFRIFEPKQLPIYRANGERELRNRWYWKLKRDTLPDGDYDVREYFLNLYDQILIEMPDYLLLKDMAVENKNSRDAGKVVDSETASICDAIFQDEETEGVIRRFIADMRQQVQADRNVVNYPSILHPIDHAFNEYFLNHQLVEPLNNEIIFNYIPERIRNDVNYILNMDMNLPSTARYIRPNLLQDRLNLHDNFESLWDTITTSNYILARSVVPDLKEKELVSTEAQIQKMSQDLQLEALTIQSETQFLAGINSQAANDCFKTLIAAMLSQRTMSLEFVTTNYMSLISGMWLLTVIPNDMFLRESLVACELAIINTIVYPAFGMQRMHYRNGDPQTPFQIAEQQIQNFQVANWLHFINNNRFRQVVIDGVLNQTLNDNIRNGQVINQLMDALMQLSRQQFPTMPVDYKRSIQRGILLLSNRLGQLVDLTRLLSYNYEILMACITMNMQHVQTLTTEKLQLTSVTSLCMLIGNTTVIPSPQTLFHYYNVNVNFHSNYNERINDAVAIITAANRLNLYQKKMKSIVEEFLKRLQIFDVPRVPDDQMYRLRDRLRLLPVERRRLDIFNLILMNMEQIERASDKIAQGVIIAYRDMQLERDEMYGYVNIARNLDGYQQINLEELMRTGDYGQITNMLLNNQPVALVGALPFVTDSSVISLIAKLDATVFAQIVKLRKVDTLKPILYKINSDSNDFYLVANYDWIPTSTTKVYKQVPQPFDFRASMHMLTSNLTFTVYSDLLAFVSADTVEPINAVAFDNMRIMNEL
