VIOLIN: Vaccine Investigation and Online Information Network

cap

General Information

Protegen ID

4281

Sequence Strain (Species/Organism)

Porcine circovirus 2

Taxonomy ID

85708

Other Database IDs

CDD:280582

Molecule Role

Protective antigen

Molecule Role Annotation

(Ding et al., 2017)

References

Ding et al., 2017: Ding P, Zhang T, Li Y, Teng M, Sun Y, Liu X, Chai S, Zhou E, Jin Q, Zhang G. Nanoparticle orientationally displayed antigen epitopes improve neutralizing antibody level in a model of porcine circovirus type 2. International journal of nanomedicine. 2017; 12; 5239-5254. [PubMed: 28769561].

Gene Information

Gene Name

cap

Protein Information

Protein Name

putative capsid protein

NCBI Protein GI

AAF35305

Protein pI

11.29

Protein Weight

26699.34

Protein Length

297

Protein Note

Cap

Protein Sequence

>AAF35305.1 putative capsid protein [Porcine circovirus 2]
MTYPRRRYRRRRHRPRSHLGQILRRRPWLVHPRHRYRWRRKNGIFNTRLSRTFGYTVKRTTVRTPSWAVD
MMRFNINDFLPPGGGSNPRSVPFEYYRIRKVKVEFWPCSPITQGDRGVGSSAVILDDNFVTKATALTYDP
YVNYSSRHTITQPFSYHSRYFTPKPVLDSTIDYFQPNNKRNQLWLRLQTAGNVDHVGLGTAFENSIYDQE
YNIRVTMYVQFREFNFKDPPLNP

Epitope Information

IEDB Linear Epitope