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Porin

General Information
Protegen ID 3829
Sequence Strain (Species/Organism) Yersinia pseudotuberculosis
Taxonomy ID 633
Other Database IDs CDD:304382
CDD:290340
CDD:238208
Molecule Role Protective antigen
Molecule Role Annotation (Tsybul'ski? et al., 2011)
References
Tsybul'skiĭ et al., 2011: Tsybul'skiĭ AV, Popov AM, Sanina NM, Mazeĭka AN, Portniagina OIu, Novikova OD, Timchenko NF, Kostetskiĭ ÉIa. [Immunogenic and protective properties of nanosized constructs based on tubular immunostimulating complexes and pore forming protein of Yersinia pseudotuberculosis]. Zhurnal mikrobiologii, epidemiologii, i immunobiologii. 2011; (2); 43-47. [PubMed: 21598614].
Gene Information
Gene Name Porin
Protein Information
Protein Name porin OmpF2
NCBI Protein GI WP_050103071
Protein pI 5.49
Protein Weight 39303.36
Protein Length 436
Protein Note Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in strand and shear number. Classical (gram-negative) porins are non-specific channels for small hydrophillic molecules and form 16 beta-stranded barrels (16,20)...; cl21487
Protein Sequence
>WP_050103071.1 porin OmpF2 [Yersinia pseudotuberculosis]
MKRNILAILIPTLLVATTSHAAEIYNKDGNKLDLYGKVKALHYFSDNTKSDGDKSYVRLGFKGVTQITDE
LSGYGQWEYNFAANYAESQEAKDNKTRLAFAGLRYSNLGSIDYGRNYGVLYDIAAWTDMLPEFGNDSYTR
TDNFMTGRTTGVATYRNTDFFGLVDGLKFSLQYQGKNGAEGETNNGRADTSKQNGDGFGLSSSYEIGAGV
SVGAAYASSNRTLAQKNSTFGKGDKADAWTTGLKYSDNGVYLAATYAETRNMTPISGTAVINNVSTSVSG
FANKTQNIELVAQYLFDFGLKPSIAYIQSKGKDIEGIGDTDLVKYVDIGATYYFNKNMSTYVDYKINQLN
DDNKLKLNTDNVVALGLVYQF

Epitope Information
IEDB Linear Epitope