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Vaxign-ML

Vaxign-ML (Vaxign - Machine Learning) is a machine learning-based vaccine candidate prediction and analysis system based on the principle of reverse vaccinology.

Vaxign-ML standalone version is available in Docker. Source code is avaiable in GitHub

Please see the Vaxign Documentation for tutorial or more information.

Vaxign-ML Query:

     

Enter Protein Sequence and Select Pathogen Type
Protein Sequence:
(Examples: Gram- B. abortus protein SodC, Gram+ Bacillus anthracis protein PA)
File Upload
Pathogen Type
help

     


Citing Vaxign-ML:
Ong E, Wang H, Wong MU, Seetharaman M, Valdez N, He Y. Vaxign-ML: supervised machine learning reverse vaccinology model for improved prediction of bacterial protective antigens. Bioinformatics. 2020 Feb 25. pii: btaa119. doi: 10.1093/bioinformatics/btaa119. PMID: 32096826 [Journal Link]

Your suggestions and comments are welcome. Thank you.