Currently, Vaxign includes
360
precomputed genomes. The following table provides the detail of these genomes.
| Index |
Pathogen Name |
No. of Strain (or RefSeq Accession) |
No. of proteins |
| 1 |
|
1 |
7 |
| | | |
| (1) |
ASFV candidates |
|
7 |
| | | |
| | | |
| | | |
| 2 |
Aeromonas hydrophila |
2 |
8555 |
| | | |
| (1) |
Aeromonas hydrophila ML09-119 |
|
4434 |
| (2) |
Aeromonas hydrophila subsp. hydrophila ATCC 7966 chromosome, complete genome |
|
4121 |
| | | |
| | | |
| | | |
| 3 |
Bacillus anthracis |
3 |
16182 |
| | | |
| (1) |
Bacillus anthracis str. 'Ames Ancestor' |
NC_007323, NC_007322(pX01), NC_007323(pX02) |
5584 |
| (2) |
Bacillus anthracis str. Ames |
NC_007530 |
5311 |
| (3) |
Bacillus anthracis str. Sterne |
NC_005945 |
5287 |
| | | |
| | | |
| | | |
| 4 |
Brucella |
31 |
98888 |
| | | |
| (1) |
Brucella abortus 2308 |
NC_007618 (Chr I), NC_007624 (Chr II) |
3034 |
| (2) |
Brucella abortus biovar 1 str. 9-941 |
NC_006932 (Chr I), NC_006933 (Chr II) |
3085 |
| (3) |
Brucella abortus bv. 2 str. 86/8/59 |
|
3233 |
| (4) |
Brucella abortus bv. 3 str. Tulya |
|
3261 |
| (5) |
Brucella abortus bv. 4 str. 292 |
|
3219 |
| (6) |
Brucella abortus bv. 6 str. 870 |
|
3219 |
| (7) |
Brucella abortus bv. 9 str. C68 |
|
3192 |
| (8) |
Brucella abortus NCTC 8038 |
|
3044 |
| (9) |
Brucella abortus S19 |
NC_010742 (Chr I), NC_010740 (Chr II) |
3000 |
| (10) |
Brucella canis ATCC 23365 |
|
3251 |
| (11) |
Brucella ceti B1/94 |
|
3189 |
| (12) |
Brucella ceti M13/05/1 |
|
3230 |
| (13) |
Brucella ceti M490/95/1 |
|
3208 |
| (14) |
Brucella ceti M644/93/1 |
|
3243 |
| (15) |
Brucella melitensis 16M |
NC_003317 (Chr I), NC_003318 (Chr II) |
3198 |
| (16) |
Brucella melitensis ATCC 23457 |
|
3136 |
| (17) |
Brucella melitensis bv. 1 str. Rev.1 |
|
3221 |
| (18) |
Brucella melitensis bv. 2 str. 63/9 |
|
3209 |
| (19) |
Brucella melitensis bv. 3 str. Ether |
|
3239 |
| (20) |
Brucella microti CCM 4915 |
|
3282 |
| (21) |
Brucella neotomae 5K33 |
|
3217 |
| (22) |
Brucella ovis ATCC 25840 |
|
2890 |
| (23) |
Brucella pinnipedialis B2/94 |
|
3290 |
| (24) |
Brucella pinnipedialis M163/99/10 |
|
3296 |
| (25) |
Brucella pinnipedialis M292/94/1 |
|
3237 |
| (26) |
Brucella sp. F5/99 |
|
3223 |
| (27) |
Brucella suis 1330 |
NC_004310 (Chr I), NC_004311 (Chr II) |
3271 |
| (28) |
Brucella suis ATCC 23445 |
|
3241 |
| (29) |
Brucella suis bv. 3 str. 686 |
|
3230 |
| (30) |
Brucella suis bv. 4 str. 40 |
|
3054 |
| (31) |
Brucella suis bv. 5 str. 513 |
|
3246 |
| | | |
| | | |
| | | |
| 5 |
Campylobacter |
10 |
17443 |
| | | |
| (1) |
Campylobacter concisus 13826 |
NC_009802, NC_009796(pCCON16), NC_009795(pCCON31) |
1985 |
| (2) |
Campylobacter curvus 525.92 |
NC_009715 |
1931 |
| (3) |
Campylobacter fetus subsp. fetus 82-40 |
NC_008599 |
1719 |
| (4) |
Campylobacter hominis ATCC BAA-381 |
NC_009714, NC_009713(pCH4) |
1687 |
| (5) |
Campylobacter jejuni RM1221 |
NC_003912 |
1838 |
| (6) |
Campylobacter jejuni subsp. doylei 269.97 |
NC_009707 |
1731 |
| (7) |
Campylobacter jejuni subsp. jejuni 81-176 |
NC_008787, NC_008770(pVir), NC_008790(pTet) |
1758 |
| (8) |
Campylobacter jejuni subsp. jejuni 81116 |
NC_009839 |
1626 |
| (9) |
Campylobacter jejuni subsp. jejuni NCTC 11168 |
NC_002163 |
1623 |
| (10) |
Campylobacter lari RM2100 |
NC_012039, NC_012040(pCL2100) |
1545 |
| | | |
| | | |
| | | |
| 6 |
Clostridium |
10 |
35130 |
| | | |
| (1) |
Clostridium botulinum A str. ATCC 19397 |
NC_009697 |
3548 |
| (2) |
Clostridium botulinum A str. ATCC 3502 |
NC_009495, NC_009496(pBOT3502) |
3590 |
| (3) |
Clostridium botulinum A str. Hall |
NC_009698 |
3404 |
| (4) |
Clostridium botulinum A2 str. Kyoto str. Kyoto-F |
NC_012563 |
3878 |
| (5) |
Clostridium botulinum A3 str. Loch Maree |
NC_010520, NC_010418(pCLK) |
3984 |
| (6) |
Clostridium botulinum B str. Eklund 17B |
NC_010674, NC_010680(pCLL) |
3527 |
| (7) |
Clostridium botulinum B1 str. Okra okra |
NC_010516, NC_010379(pCLD) |
3852 |
| (8) |
Clostridium botulinum E3 str. Alaska E43 |
NC_010723 |
3256 |
| (9) |
Clostridium botulinum F str. Langeland |
NC_009699, NC_009700(pCLI) |
3659 |
| (10) |
Clostridium tetani E88 |
NC_004557, NC_004565(pE88) |
2432 |
| | | |
| | | |
| | | |
| 7 |
Clostridium difficile |
13 |
48849 |
| | | |
| (1) |
Clostridium difficile 630 |
|
3798 |
| (2) |
Clostridium difficile ATCC 43255 |
|
3905 |
| (3) |
Clostridium difficile BI1 |
|
3934 |
| (4) |
Clostridium difficile CD196 |
|
3454 |
| (5) |
Clostridium difficile CIP 107932 |
|
3643 |
| (6) |
Clostridium difficile QCD-23m63 |
|
3582 |
| (7) |
Clostridium difficile QCD-32g58 |
|
3307 |
| (8) |
Clostridium difficile QCD-37x79 |
|
4042 |
| (9) |
Clostridium difficile QCD-63q42 |
|
4188 |
| (10) |
Clostridium difficile QCD-66c26 |
|
3723 |
| (11) |
Clostridium difficile QCD-76w55 |
|
4056 |
| (12) |
Clostridium difficile QCD-97b34 |
|
3711 |
| (13) |
Clostridium difficile R20291 |
|
3506 |
| | | |
| | | |
| | | |
| 8 |
Corynebacterium |
14 |
33665 |
| | | |
| (1) |
Corynebacterium aurimucosum ATCC 700975 |
|
2551 |
| (2) |
Corynebacterium diphtheriae NCTC 13129 |
NC_002935 |
2272 |
| (3) |
Corynebacterium diphtheriae NCTC 13129 |
|
2272 |
| (4) |
Corynebacterium efficiens YS-314 |
|
2994 |
| (5) |
Corynebacterium glutamicum ATCC 13032 |
|
3057 |
| (6) |
Corynebacterium glutamicum ATCC 13032 |
|
2993 |
| (7) |
Corynebacterium glutamicum R |
|
3080 |
| (8) |
Corynebacterium jeikeium K411 |
|
2120 |
| (9) |
Corynebacterium kroppenstedtii DSM 44385 |
|
2018 |
| (10) |
Corynebacterium pseudotuberculosis 1002 |
|
2057 |
| (11) |
Corynebacterium pseudotuberculosis C231 |
|
2053 |
| (12) |
Corynebacterium pseudotuberculosis FRC41 |
|
2110 |
| (13) |
Corynebacterium pseudotuberculosis I19 |
|
2066 |
| (14) |
Corynebacterium urealyticum DSM 7109 |
|
2022 |
| | | |
| | | |
| | | |
| 9 |
Coxiella burnetii |
5 |
9686 |
| | | |
| (1) |
Coxiella burnetii CbuG_Q212 |
NC_011527 |
1871 |
| (2) |
Coxiella burnetii CbuK_Q154 |
NC_011528, NC_011526(pQpRS_K_Q154) |
1947 |
| (3) |
Coxiella burnetii Dugway 5J108-111 |
NC_009727, NC_009726(pQpDG) |
2045 |
| (4) |
Coxiella burnetii RSA 331 |
NC_010117, NC_010115(QpH1) |
1975 |
| (5) |
Coxiella burnetii RSA 493 |
NC_002971, NC_004704(pQpH1) |
1848 |
| | | |
| | | |
| | | |
| 10 |
Escherichia coli |
11 |
53932 |
| | | |
| (1) |
Escherichia coli 536 |
NC_008253 |
4620 |
| (2) |
Escherichia coli CFT073 |
NC_004431 |
5339 |
| (3) |
Escherichia coli F11 |
NZ_AAJU00000000 |
4704 |
| (4) |
Escherichia coli O157:H7 str. EC 4115 |
|
5477 |
| (5) |
Escherichia coli O157:H7 str. EDL933 |
|
5449 |
| (6) |
Escherichia coli O157:H7 str. Sakai |
NC_002695, NC_002128 (pO157), NC_002127 (pOSAK1) |
5318 |
| (7) |
Escherichia coli O157:H7 str. TW14359 |
|
5373 |
| (8) |
Escherichia coli str. K-12 substr. DH10B |
|
4126 |
| (9) |
Escherichia coli str. K-12 substr. MG1655 |
NC_000913 |
4133 |
| (10) |
Escherichia coli str. K-12 substr. W3110 |
|
4227 |
| (11) |
Escherichia coli UTI89 |
NC_007946, NC_007941(pUTI89) |
5166 |
| | | |
| | | |
| | | |
| 11 |
Flavobacterium columnare |
1 |
2642 |
| | | |
| (1) |
Flavobacterium columnare ATCC 49512 |
|
2642 |
| | | |
| | | |
| | | |
| 12 |
Francisella |
9 |
14771 |
| | | |
| (1) |
Francisella philomiragia subsp. philomiragia ATCC 25017 |
NC_010336, NC_010331(pFPHI01) |
1915 |
| (2) |
Francisella tularensis subsp. holarctica |
NC_007880 |
1754 |
| (3) |
Francisella tularensis subsp. holarctica FTNF002-00 |
NC_009749 |
1580 |
| (4) |
Francisella tularensis subsp. holarctica OSU18 |
NC_008369 |
1555 |
| (5) |
Francisella tularensis subsp. mediasiatica FSC147 |
NC_010677 |
1406 |
| (6) |
Francisella tularensis subsp. novicida U112 |
NC_008601 |
1719 |
| (7) |
Francisella tularensis subsp. tularensis FSC198 |
NC_008245 |
1605 |
| (8) |
Francisella tularensis subsp. tularensis SCHU S4 |
NC_006570 |
1603 |
| (9) |
Francisella tularensis subsp. tularensis WY96-3418 |
NC_009257 |
1634 |
| | | |
| | | |
| | | |
| 13 |
Haemophilus influenzae |
4 |
6735 |
| | | |
| (1) |
Haemophilus influenzae 86-028NP |
NC_007146 |
1792 |
| (2) |
Haemophilus influenzae PittEE |
NC_009566 |
1619 |
| (3) |
Haemophilus influenzae PittGG |
NC_009567 |
1667 |
| (4) |
Haemophilus influenzae Rd KW20 |
NC_000907 |
1657 |
| | | |
| | | |
| | | |
| 14 |
Helicobacter pylori |
6 |
9261 |
| | | |
| (1) |
Helicobacter pylori 26695 |
NC_000915 |
1576 |
| (2) |
Helicobacter pylori G27 |
NC_011333, NC_011334(pHPG27) |
1504 |
| (3) |
Helicobacter pylori HPAG1 |
NC_008086, NC_008087(pHPAG1) |
1544 |
| (4) |
Helicobacter pylori J99 |
NC_000921 |
1489 |
| (5) |
Helicobacter pylori P12 |
NC_011498, NC_011499(HPP12) |
1579 |
| (6) |
Helicobacter pylori Shi470 |
NC_010698 |
1569 |
| | | |
| | | |
| | | |
| 15 |
Herpesvirus |
52 |
5104 |
| | | |
| (1) |
Alcelaphine herpesvirus 1, complete genome |
NC_002531.1 |
71 |
| (2) |
Anatid herpesvirus 1, complete genome |
NC_013036.1 |
77 |
| (3) |
Anguillid herpesvirus 1, complete genome |
NC_013668.3 |
143 |
| (4) |
Ateline herpesvirus 3, complete genome |
NC_001987.1 |
73 |
| (5) |
Bovine herpesvirus 1, complete genome |
NC_001847.1 |
70 |
| (6) |
Bovine herpesvirus 4, complete genome |
NC_002665.1 |
79 |
| (7) |
Bovine herpesvirus 5, complete genome |
NC_005261.2 |
70 |
| (8) |
Callitrichine herpesvirus 3, complete genome |
NC_004367.1 |
72 |
| (9) |
Caviid herpesvirus 2, complete genome |
NC_011587.1 |
106 |
| (10) |
Cercopithecine herpesvirus 2, complete genome |
NC_006560.1 |
75 |
| (11) |
Cercopithecine herpesvirus 9, complete genome |
NC_002686.2 |
74 |
| (12) |
Cyprinid herpesvirus 3, complete genome |
NC_009127.1 |
160 |
| (13) |
Equid herpesvirus 2, complete genome |
NC_001650.1 |
79 |
| (14) |
Equid herpesvirus 4, complete genome |
NC_001844.1 |
79 |
| (15) |
Equid herpesvirus 9, complete genome |
NC_011644.1 |
80 |
| (16) |
Felid herpesvirus 1, complete genome |
NC_013590.2 |
77 |
| (17) |
Gallid herpesvirus 1, complete genome |
NC_006623.1 |
79 |
| (18) |
Gallid herpesvirus 2, complete genome |
NC_002229.3 |
85 |
| (19) |
Gallid herpesvirus 3, complete genome |
NC_002577.1 |
76 |
| (20) |
Human herpesvirus 1 |
NC_001806.1 |
77 |
| (21) |
Human herpesvirus 1 strain F, complete genome |
GU734771.1 |
77 |
| (22) |
Human herpesvirus 1 strain H129, complete genome |
GU734772.1 |
77 |
| (23) |
Human herpesvirus 2 |
NC_001798.1 |
77 |
| (24) |
Human herpesvirus 3 |
NC_001348.1 |
73 |
| (25) |
Human herpesvirus 4 |
NC_009334.1 |
80 |
| (26) |
Human herpesvirus 4 type 1 |
NC_007605.1 |
94 |
| (27) |
Human herpesvirus 5 |
NC_006273.2 |
165 |
| (28) |
Human herpesvirus 6A |
NC_001664.2 |
88 |
| (29) |
Human herpesvirus 6B |
NC_000898.1 |
104 |
| (30) |
Human herpesvirus 7 |
NC_001716.2 |
86 |
| (31) |
Human herpesvirus 8 |
NC_009333.1 |
86 |
| (32) |
Ictalurid herpesvirus 1, complete genome |
NC_001493.1 |
90 |
| (33) |
Macacine herpesvirus 1, complete genome |
NC_004812.1 |
75 |
| (34) |
Macacine herpesvirus 3, complete genome |
NC_006150.1 |
223 |
| (35) |
Macacine herpesvirus 4, complete genome |
NC_006146.1 |
80 |
| (36) |
Macacine herpesvirus 5, genome |
NC_003401.1 |
89 |
| (37) |
Meleagrid herpesvirus 1, complete genome |
NC_002641.1 |
79 |
| (38) |
Murid herpesvirus 1, complete genome |
NC_004065.1 |
161 |
| (39) |
Murid herpesvirus 2, complete genome |
NC_002512.2 |
167 |
| (40) |
Murid herpesvirus 4, complete genome |
NC_001826.2 |
74 |
| (41) |
Ostreid herpesvirus 1, complete genome |
AY509253.1 |
127 |
| (42) |
Ovine herpesvirus 2, complete genome |
NC_007646.1 |
73 |
| (43) |
Panine herpesvirus 2, complete genome |
NC_003521.1 |
165 |
| (44) |
Papiine herpesvirus 2, complete genome |
NC_007653.1 |
75 |
| (45) |
Psittacid herpesvirus 1, complete genome |
NC_005264.1 |
77 |
| (46) |
Ranid herpesvirus 1, complete genome |
NC_008211.1 |
132 |
| (47) |
Ranid herpesvirus 2, complete genome |
NC_008210.1 |
147 |
| (48) |
Rodent herpesvirus Peru, complete genome |
NC_015049.1 |
82 |
| (49) |
Saimiriine herpesvirus 1, complete genome |
NC_014567.1 |
70 |
| (50) |
Saimiriine herpesvirus 2, complete genome |
NC_001350.1 |
76 |
| (51) |
Suid herpesvirus 1, complete genome |
NC_006151.1 |
175 |
| (52) |
Tupaiid herpesvirus 1, complete genome |
NC_002794.1 |
158 |
| | | |
| | | |
| | | |
| 16 |
Human immunodeficiency virus |
2 |
33 |
| | | |
| (1) |
Human immunodeficiency virus 1 |
NC_001802 |
24 |
| (2) |
Human immunodeficiency virus 2 |
NC_001722 |
9 |
| | | |
| | | |
| | | |
| 17 |
Legionella pneumophila |
9 |
28118 |
| | | |
| (1) |
Legionella pneumophila 130b |
|
3141 |
| (2) |
Legionella pneumophila 2300/99 Alcoy |
|
3190 |
| (3) |
Legionella pneumophila LPE509 |
|
3282 |
| (4) |
Legionella pneumophila str. Corby |
|
3206 |
| (5) |
Legionella pneumophila str. Lens |
|
2934 |
| (6) |
Legionella pneumophila str. Paris |
|
3166 |
| (7) |
Legionella pneumophila subsp. pneumophila ATCC 43290 |
|
2926 |
| (8) |
Legionella pneumophila subsp. pneumophila str. LPE509 |
|
3331 |
| (9) |
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 |
|
2942 |
| | | |
| | | |
| | | |
| 18 |
Listeria monocytogenes |
3 |
8641 |
| | | |
| (1) |
Listeria monocytogenes EGD-e |
|
2846 |
| (2) |
Listeria monocytogenes HCC23 |
|
2974 |
| (3) |
Listeria monocytogenes str. 4b F2365 |
|
2821 |
| | | |
| | | |
| | | |
| 19 |
Lymphocystis virus |
4 |
515 |
| | | |
| (1) |
Glossina pallidipes salivary gland hypertrophy virus, complete genome |
|
160 |
| (2) |
Lymphocystis disease virus - isolate China, complete genome |
|
239 |
| (3) |
Lymphocystis disease virus 1, complete genome |
|
110 |
| (4) |
Viral hemorrhagic septicemia virus, complete genome |
|
6 |
| | | |
| | | |
| | | |
| 20 |
Measles virus |
1 |
7 |
| | | |
| (1) |
Measles virus |
NC_001498 |
7 |
| | | |
| | | |
| | | |
| 21 |
Mycobacterium |
15 |
64072 |
| | | |
| (1) |
Mycobacterium avium 104 |
|
5120 |
| (2) |
Mycobacterium avium subsp. paratuberculosis K-10 |
|
4350 |
| (3) |
Mycobacterium bovis AF2122/97 |
|
3918 |
| (4) |
Mycobacterium bovis BCG str. Pasteur 1173P2 |
|
3949 |
| (5) |
Mycobacterium intracellulare ATCC 13950 |
|
5232 |
| (6) |
Mycobacterium kansasii ATCC 12478 |
|
5913 |
| (7) |
Mycobacterium leprae Br4923 |
|
1604 |
| (8) |
Mycobacterium leprae TN |
|
1605 |
| (9) |
Mycobacterium marinum M |
|
5452 |
| (10) |
Mycobacterium smegmatis str. MC2 155 |
|
6717 |
| (11) |
Mycobacterium tuberculosis CDC1551 |
NC_002755 |
4189 |
| (12) |
Mycobacterium tuberculosis F11 |
|
3941 |
| (13) |
Mycobacterium tuberculosis H37Ra |
|
4034 |
| (14) |
Mycobacterium tuberculosis H37Rv |
NC_000962 |
3989 |
| (15) |
Mycobacterium tuberculosis KZN 1435 |
|
4059 |
| | | |
| | | |
| | | |
| 22 |
Mycoplasma bovis |
2 |
1566 |
| | | |
| (1) |
Mycoplasma bovis Hubei-1 |
|
801 |
| (2) |
Mycoplasma bovis PG45 |
|
765 |
| | | |
| | | |
| | | |
| 23 |
Mycoplasma hyopneumoniae |
3 |
2005 |
| | | |
| (1) |
Mycoplasma hyopneumoniae 232 |
|
691 |
| (2) |
Mycoplasma hyopneumoniae 7448 |
|
657 |
| (3) |
Mycoplasma hyopneumoniae J |
|
657 |
| | | |
| | | |
| | | |
| 24 |
Mycoplasma mycoides |
4 |
3773 |
| | | |
| (1) |
Mycoplasma mycoides subsp. capri str. GM12 |
|
830 |
| (2) |
Mycoplasma mycoides subsp. capri str. GM12 |
|
832 |
| (3) |
Mycoplasma mycoides subsp. mycoides SC str. Gladysdale |
|
1095 |
| (4) |
Mycoplasma mycoides subsp. mycoides SC str. PG1 |
|
1016 |
| | | |
| | | |
| | | |
| 25 |
Neisseria meningitidis |
4 |
7909 |
| | | |
| (1) |
Neisseria meningitidis 053442 |
NC_010120 |
2020 |
| (2) |
Neisseria meningitidis FAM18 |
NC_008767 |
1917 |
| (3) |
Neisseria meningitidis MC58 |
NC_003112 |
2063 |
| (4) |
Neisseria meningitidis Z2491 |
NC_003116 |
1909 |
| | | |
| | | |
| | | |
| 26 |
Rickettsia |
1 |
835 |
| | | |
| (1) |
Rickettsia prowazekii str. Madrid E |
|
835 |
| | | |
| | | |
| | | |
| 27 |
Salmonella |
23 |
104008 |
| | | |
| (1) |
Salmonella bongori NCTC 12419 |
|
3864 |
| (2) |
Salmonella enterica serovar Typhimurium |
|
4446 |
| (3) |
Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 |
|
4510 |
| (4) |
Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|
4614 |
| (5) |
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 |
|
4666 |
| (6) |
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|
4617 |
| (7) |
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 |
|
4206 |
| (8) |
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 |
|
3965 |
| (9) |
Salmonella enterica subsp. enterica serovar Gallinarum str. RKS5078 |
|
4325 |
| (10) |
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|
4779 |
| (11) |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|
4805 |
| (12) |
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 |
|
4080 |
| (13) |
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 |
|
4093 |
| (14) |
Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 |
|
4640 |
| (15) |
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|
4627 |
| (16) |
Salmonella enterica subsp. enterica serovar Typhi str. CT18 |
|
4766 |
| (17) |
Salmonella enterica subsp. enterica serovar Typhi str. Ty2 |
|
4323 |
| (18) |
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S |
|
5413 |
| (19) |
Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74 |
|
4842 |
| (20) |
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
|
4554 |
| (21) |
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 |
|
4447 |
| (22) |
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 |
|
4871 |
| (23) |
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 |
|
4555 |
| | | |
| | | |
| | | |
| 28 |
Shigella |
5 |
21517 |
| | | |
| (1) |
Shigella boydii CDC 3083-94 BS512 |
|
4557 |
| (2) |
Shigella boydii Sb227 |
|
4282 |
| (3) |
Shigella dysenteriae Sd197 |
|
4502 |
| (4) |
Shigella flexneri 2a str. 2457T |
|
4061 |
| (5) |
Shigella flexneri 5 str. 8401 |
|
4115 |
| | | |
| | | |
| | | |
| 29 |
Staphylococcus aureus |
33 |
86660 |
| | | |
| (1) |
Staphylococcus aureus 04-02981 |
|
2650 |
| (2) |
Staphylococcus aureus 08BA02176 |
|
2703 |
| (3) |
Staphylococcus aureus RF122 |
|
2509 |
| (4) |
Staphylococcus aureus subsp. aureus 11819-97 |
|
2656 |
| (5) |
Staphylococcus aureus subsp. aureus 71193 |
|
2623 |
| (6) |
Staphylococcus aureus subsp. aureus COL |
|
2615 |
| (7) |
Staphylococcus aureus subsp. aureus ECT-R 2 |
|
2520 |
| (8) |
Staphylococcus aureus subsp. aureus ED133 |
|
2653 |
| (9) |
Staphylococcus aureus subsp. aureus ED98 |
|
2689 |
| (10) |
Staphylococcus aureus subsp. aureus HO 5096 0412 |
|
2547 |
| (11) |
Staphylococcus aureus subsp. aureus JH1 |
|
2780 |
| (12) |
Staphylococcus aureus subsp. aureus JH9 |
|
2726 |
| (13) |
Staphylococcus aureus subsp. aureus JKD6159 |
|
2577 |
| (14) |
Staphylococcus aureus subsp. aureus LGA251 |
|
2433 |
| (15) |
Staphylococcus aureus subsp. aureus M013 |
|
2341 |
| (16) |
Staphylococcus aureus subsp. aureus MN8 |
|
2833 |
| (17) |
Staphylococcus aureus subsp. aureus MRSA252 |
|
2650 |
| (18) |
Staphylococcus aureus subsp. aureus MSHR1132 |
|
2278 |
| (19) |
Staphylococcus aureus subsp. aureus MSSA476 |
|
2590 |
| (20) |
Staphylococcus aureus subsp. aureus Mu3 |
|
2690 |
| (21) |
Staphylococcus aureus subsp. aureus Mu50 |
|
2730 |
| (22) |
Staphylococcus aureus subsp. aureus MW2 |
|
2375 |
| (23) |
Staphylococcus aureus subsp. aureus N315 |
|
2614 |
| (24) |
Staphylococcus aureus subsp. aureus NCTC 8325 |
|
2891 |
| (25) |
Staphylococcus aureus subsp. aureus ST398 |
|
2710 |
| (26) |
Staphylococcus aureus subsp. aureus str. JKD6008 |
|
2680 |
| (27) |
Staphylococcus aureus subsp. aureus str. Newman |
|
2614 |
| (28) |
Staphylococcus aureus subsp. aureus T0131 |
|
2711 |
| (29) |
Staphylococcus aureus subsp. aureus TCH60 |
|
2700 |
| (30) |
Staphylococcus aureus subsp. aureus TW20 |
|
2807 |
| (31) |
Staphylococcus aureus subsp. aureus USA300_FPR3757 |
|
2604 |
| (32) |
Staphylococcus aureus subsp. aureus USA300_TCH1516 |
|
2693 |
| (33) |
Staphylococcus aureus subsp. aureus VC40 |
|
2468 |
| | | |
| | | |
| | | |
| 30 |
Streptococcus |
53 |
105631 |
| | | |
| (1) |
Streptococcus mitis ATCC 6249 |
|
1793 |
| (2) |
Streptococcus mitis B6 |
|
2004 |
| (3) |
Streptococcus mitis NCTC 12261 |
|
1394 |
| (4) |
Streptococcus mitis SK321 |
|
1254 |
| (5) |
Streptococcus mitis SK564 |
|
1498 |
| (6) |
Streptococcus mitis SK597 |
|
727 |
| (7) |
Streptococcus mutans NN2025 |
|
1895 |
| (8) |
Streptococcus mutans UA159 |
|
1960 |
| (9) |
Streptococcus oralis ATCC 35037(uid: 6827) |
|
1847 |
| (10) |
Streptococcus oralis ATCC 35037(uid: 7085) |
|
777 |
| (11) |
Streptococcus oralis Uo5 |
|
1907 |
| (12) |
Streptococcus pneumoniae 670-6B |
|
2352 |
| (13) |
Streptococcus pneumoniae 70585 |
|
2202 |
| (14) |
Streptococcus pneumoniae AP200 |
|
2216 |
| (15) |
Streptococcus pneumoniae ATCC 700669 |
|
1990 |
| (16) |
Streptococcus pneumoniae BS397 |
|
2215 |
| (17) |
Streptococcus pneumoniae BS455 |
|
2061 |
| (18) |
Streptococcus pneumoniae BS457 |
|
2136 |
| (19) |
Streptococcus pneumoniae BS458 |
|
2109 |
| (20) |
Streptococcus pneumoniae CCRI 1974 |
|
1979 |
| (21) |
Streptococcus pneumoniae CCRI 1974M2 |
|
1957 |
| (22) |
Streptococcus pneumoniae CDC0288-04 |
|
1801 |
| (23) |
Streptococcus pneumoniae CDC1087-00 |
|
1702 |
| (24) |
Streptococcus pneumoniae CDC1873-00 |
|
1995 |
| (25) |
Streptococcus pneumoniae CDC3059-06 |
|
1869 |
| (26) |
Streptococcus pneumoniae CGSP14 |
|
2206 |
| (27) |
Streptococcus pneumoniae D39 |
|
1914 |
| (28) |
Streptococcus pneumoniae G54 |
|
2114 |
| (29) |
Streptococcus pneumoniae Hungary19A-6 |
|
2155 |
| (30) |
Streptococcus pneumoniae INV104 |
|
1824 |
| (31) |
Streptococcus pneumoniae INV200 |
|
1929 |
| (32) |
Streptococcus pneumoniae JJA |
|
2123 |
| (33) |
Streptococcus pneumoniae MLV-016 |
|
1830 |
| (34) |
Streptococcus pneumoniae OXC141 |
|
1823 |
| (35) |
Streptococcus pneumoniae P1031 |
|
2073 |
| (36) |
Streptococcus pneumoniae R6 |
|
2042 |
| (37) |
Streptococcus pneumoniae SP-BS293 |
|
2200 |
| (38) |
Streptococcus pneumoniae SP11-BS70 |
|
2304 |
| (39) |
Streptococcus pneumoniae SP14-BS292 |
|
2263 |
| (40) |
Streptococcus pneumoniae SP14-BS69 |
|
2597 |
| (41) |
Streptococcus pneumoniae SP18-BS74 |
|
2406 |
| (42) |
Streptococcus pneumoniae SP19-BS75 |
|
2463 |
| (43) |
Streptococcus pneumoniae SP195 |
|
1941 |
| (44) |
Streptococcus pneumoniae SP23-BS72 |
|
2410 |
| (45) |
Streptococcus pneumoniae SP3-BS71 |
|
2364 |
| (46) |
Streptococcus pneumoniae SP6-BS73 |
|
2479 |
| (47) |
Streptococcus pneumoniae SP9-BS68 |
|
2400 |
| (48) |
Streptococcus pneumoniae ST556 |
|
2260 |
| (49) |
Streptococcus pneumoniae str. Canada MDR_19A |
|
1811 |
| (50) |
Streptococcus pneumoniae str. Canada MDR_19F |
|
1636 |
| (51) |
Streptococcus pneumoniae Taiwan19F-14 |
|
2044 |
| (52) |
Streptococcus pneumoniae TCH8431/19A |
|
2275 |
| (53) |
Streptococcus pneumoniae TIGR4 |
|
2105 |
| | | |
| | | |
| | | |
| 31 |
Streptococcus pneumoniae |
1 |
2202 |
| | | |
| (1) |
Streptococcus pneumoniae 70585 |
|
2202 |
| | | |
| | | |
| | | |
| 32 |
Vaccinia virus |
1 |
223 |
| | | |
| (1) |
Vaccinia virus |
NC_006998 |
223 |
| | | |
| | | |
| | | |
| 33 |
Variola virus |
1 |
197 |
| | | |
| (1) |
Variola virus |
NC_001611 |
197 |
| | | |
| | | |
| | | |
| 34 |
Vibrio |
22 |
50267 |
| | | |
| (1) |
Vibrio anguillarum 775 chromosome chromosome I, complete sequence |
|
2812 |
| (2) |
Vibrio cholerae Ban5 |
|
100 |
| (3) |
Vibrio cholerae Ind4 |
|
89 |
| (4) |
Vibrio cholerae Ind5 |
|
96 |
| (5) |
Vibrio cholerae LMA3894-4 |
|
3153 |
| (6) |
Vibrio cholerae M66-2 |
|
3693 |
| (7) |
Vibrio cholerae Mex1 |
|
78 |
| (8) |
Vibrio cholerae MJ-1236 chromosome 1, complete genome |
|
2768 |
| (9) |
Vibrio cholerae O1 biovar eltor str. N16961 |
|
3835 |
| (10) |
Vibrio cholerae O395 |
|
3934 |
| (11) |
Vibrio cholerae O395 chromosome 1, complete sequence |
|
1133 |
| (12) |
Vibrio fischeri ES114 chromosome I, complete genome |
|
2586 |
| (13) |
Vibrio fischeri MJ11 chromosome II, complete sequence |
|
1254 |
| (14) |
Vibrio fluvialis Ind1 |
|
111 |
| (15) |
Vibrio furnissii NCTC 11218 |
|
4462 |
| (16) |
Vibrio harveyi ATCC BAA-1116 chromosome I, complete genome |
|
3548 |
| (17) |
Vibrio parahaemolyticus RIMD 2210633 chromosome chromosome 1, complete sequence |
|
3080 |
| (18) |
Vibrio sp. Ex25 chromosome chromosome 1, complete sequence |
|
2915 |
| (19) |
Vibrio splendidus LGP32 chromosome 2, complete genome |
|
1485 |
| (20) |
Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence |
|
2896 |
| (21) |
Vibrio vulnificus MO6-24/O chromosome chromosome I, complete sequence |
|
2980 |
| (22) |
Vibrio vulnificus YJ016 chromosome I, complete sequence |
|
3259 |
| | | |
| | | |
| | | |
| 35 |
Yellow fever virus |
1 |
14 |
| | | |
| (1) |
Yellow fever virus |
NC_002031 |
14 |
| | | |
| | | |
| | | |
| Total |
36 |
360 |
849043 |
