VIOLIN Logo
VIOLIN Banner
Search: for Help
Vaximmutordb Home
Introduction
Statistics
News and Updates
Vaximmutordb Query
Vaximmutordb BLAST
Data Submission
Data Exchange
Data Download
Documentation
FAQs
Acknowledgements
Disclaimer
Contact Us
UMMS Logo

HMGB1

Gene Name HMGB1
Sequence Strain (Species/Organism) Homo sapiens
NCBI Gene ID 3146
NCBI Protein GI 4504425
Locus Tag RP11-550P23.1
Genbank Accession ABBA01035698
Protein Accession NP_002119
Taxonomy ID 9606
Chromosome No 13
Gene Starting Position 30458739
Gene Ending Position 30465943
Gene Strand (Orientation) -
Protein Name transcript variant X6
Protein pI 5.42
Protein Weight 24396.67
Protein Length 215
Protein Note Also known as HMG1; HMG3; SBP-1
DNA Sequence
>gi|568815585:30458739-30465943 Homo sapiens chromosome 13, GRCh38 Primary Assembly
CTTTTCTTATCTTTATCATTTAATCATTACCCCTCGGGTACACAGGACACACAAATTTCATTTTTCAGAT
TTCACTTTAAGAAAATTAATAAATACAGCAAACATTAACAACACTGTGATGGGACGATCATCAGAACTGT
GGTAACTAATCAGCAATAGCTCTCAACCTTTGCACAGCAAAGTTAGGAAATTTGACTCGTTAATCAATAT
GCCATATGCCTATCTTTAAAATACAAAAAAACTAAGATTTATACATCTTAGTTCATTAGTTTTAAAAAGC
ATCTTCATTTTAAAAGTTGGCCCAATTAATTATAGATTTAGTCTTTTCTTGATGTCAACAAAGTCTTTAA
ACCCCACAGCACTGTAACTATCTTGGCATTAAAATAGTTTCTATACACTTTCTAAAAAAAATCATCTTCA
GTTACAAGGCTTTACACTTATCTAAATTGCCTCCCACTTCCATTTACTTGAGTTTTAGACATCCAACTTC
TAGGGGATACTGTTAGAACACCAAACCATACTAATCTTCAGATTGAAGAGGGGTTTTGTCCATTTTCTTA
AGATCTGTGGTCAAGAATAAACCCTAAAAAAACTGTTCCCATTCTCAACATCTTAAAAAAATGGTAGTTG
TCATGACGTACCTACTAAAGTTACAAATTCTCCTTGAGCCAGAATTCATTTTAAATGGATCAGAATTATT
AATGTTGGTGATTAATGGTGATTTCTATACAGTAGAAACTTCCATCTAAATCAGATTGAGTCATTTGCTC
CTCTTAACAAAAAATCTGATGTTCGACACAATTGCAGCCTATCACTAACCCTGCTGTTCGCTTGCATGTA
TCTTGTTTTTAAAAATCTTGTTTAAATCATTCTGAAAGTAAAACTAGTTTTTCCTCCTTTATATATAGCA
CCGAATACTTGCAATGTTTGACAAAACCTTTTATCAGCCCATTAACCTATTTATAAGCATAAAGTGAGTA
TTTTTAAAGGGAAAAACTTTGCCATCCCTTATACTTATTTAAAAGGTACTGCTAAGAGGTATTATTAGAA
ACAAGATTTAAAAATATGTAACAAAATCTTAAGTTCTTAAGTGAAAGCCATTTAACTAGTATTTAAAACC
TCTGCAATTATTAGTTTATTAGTATCATCCAGGACTCAGATGTTCAGTATTCCTCCTGAAATTACATAAA
CAAATGCAAATGGAAAGAATCCAAGTCTAAATTATATAACAAAACAGCACTCCATCACAAAAGCGTGTAA
AATTACAAGAACGCTATTTTAAAATACTGGCACTTTAAGAAAACGATAATCTCGAAAACCACAAAATTGC
CAAATTGTTCCCTAAACTCCTAAGCAGATAAACATGACTAATGAATGAGTTTGTTTTGTAAAGAAAAATC
ATTCAAATAAATTGAATAATTCATACTGAGATGCAAAGTTTGTCTTCTTTCTTCCTATCTACTTGGATTT
ATAAAGGGGCAAACCGTAATATAGGAAAATATACCCTATTTTGAATGTGGCATCTTTGTTTGAAAAGCTG
GCCCAATTAATTAAAAATACTTGTAATGGAAAGTCTCGTTTCCTGAGCAGTCCATATTTAGATAAATGGG
AAAAGACATCTATAGCCAGCATTTTCATAGTCTTCACTGAGACTAATGTCAACAAAAAATTTAATATGGC
AGTCTTGTATTTTAAGCTCACGCTTTTGGGGATACATTCTCAGGTCTTCTTTAATGTGGGAACTGCAAAA
TATAACTGCCATTACATGGTAATGGGAGTTAAAGAATAGAGTCCTCATGTAAAGGTTAGAACATACTTTT
CTATTAGTCCTTCAAGGACAGACTTTCAAAATGTTTGATTCTAATAATCCCATGCTTTGAGTAGATTGAT
TACTCTTCAGTTTGTAAATGTAAGTGGGCTATGTGAAATTTCTTAACTGATCAAGATTTTGGATGTTCAG
TTATGGATGAAAACTATCTCAACTTAACTTTACCCCCATTATGATATGCAGGGTGTGTAGACAAAAGCTT
TTTATTAGCTAACTATATGAAAGGATAAACACTGTAATAATTCATGTGATTCAAAATGGGCAAAAGCAAA
AGACTAGCTTCCCCTCAAGAAGAAAAATTTCAGACCTATGAAAAGGACAACAATACTAATAAAAAAAATT
GTATTTACTTAGAAGCATTCAGAATGTCAACAAAACAGCTGCAACTTTTTTTTTTTTTTTGCAATTACAG
AGTGGTATTCAGTTAACAGAACAACAATTATTTCGTATAAGCTGCATCAGAGACAACTGAAGATGAAAAA
ACTACCATCCCCATATATAACTAATTTGTGCTGTGCACCAACAAGAACCTGCTTTAAATTTCCATGCCAA
TTTACAACCCCCATACTGTACCAGGCAAGGTTAGTGGCTATTGAAAATACCACCAGGACAGGGCTATCTA
AAGACACATTCGGTAGTGTGTTAACTATACAAAAAAAGACACTGTACAGTTTAAAAACAAATCTTACACA
GCCTTACATTTCAATTTTTTTCTTTAAAAGGAGTGAGTTGTGTACAGGGGGGTTAAATGCTTTATAGACA
AGAAAAAAAAAACTGCGCTAGAACCAACTTATTCATCATCATCATCTTCTTCTTCATCTTCATCTTCTTC
ATCTTCCTCCTCCTCCTCATCCTCTTCATCTTCCTCATCTTCCTCCTCTTCCTTCTTTTTCTTGCTTTTT
TCAGCCTTGACAACTCCCTTTTTTGCTGCATCAGGCTTTCCTTTAGCTCGATATGCAGCAATATCCTTCC
AAAGCAAAGGGAGGATAAAACAGTAGGGAAGAAAAAAACATTAAGGAAAGAAATAGAACATGGCAGAACT
TTATGAAAGAAATCAAGATTCTAGTTATACCAAAATATCACGTATCTGTAGATCCACAGCAACTCCAGAA
ATAACTAGAACTTCAATAAATGAACATAAAAATACAAGATCATTATAACAATCTATAACTCATGAAATGG
CATAGTCTAATATTTGCAAAGTTATGCCTCATTGAGGTGCAATTATGTACCACATCCTAACTCTATTAAA
ACCAGAATGTAGAGACTTTGATTAAAGGGTAGACACTGCCACCTTCTGAATGCAAAAAAGCACTCTACAG
GTTTACACTGTCAGACCTTAATCCTTAGTAGGAAATGTGGTCTTAAAAAAAAAAGGTAATTTGTCAATAA
ACATGCAATTAGGTTAAGAAACATCTAGAAATAAACACTTTTCAGAATGACTAAAGCTGAAAATTAAGTA
TTTAATATTTCAATTTACTGAACTATAAGAGTTATAGATTTCCTTAATCTTATTAATTTACTGGACAGAG
CAGCAGACTTGTAATTTAACTTAGTGATGCTGTGGTTTTTTGAGTATCTAAAGGAAAAGAACATAAATGT
TTCAGGATATGACTAAGAAAAATATAGCCTATATTACTTTGTCTAGCCTGTTTTTGTACTGTATGCCAAG
CCATTTGAAAATGCTCATTTTTGACTTGAAGTGACTACCAACATTTTCATGAACTTCAAGATACTGGGGA
ATAACAAAACCAACATAAATGTACACAGCCTTTGTCTGAGTCTGATTACATTTTAGTCAAAAAAACCCTA
ATTTATTTGGTCCTCTGCATTCTTTGAAGGATGAGGACTTATATCAACACCATACTTAATGTAGCTGTTA
CCCTAAAAACTTATTACACCTCAAACTAAGTACAATCATACATCTGGCGTACTTGTCATCATTTTACCAA
GCAAACCCACACTTCTTACCTTTTCATATTTTTCCTTCAGCTTCGCAGCCTTCTTTTCATAAGGCTGCTT
GTCATCTGCAGCAGTGTTATTCCACATCTCTCCCAGTTTCTTCGCAACATCACCAATGGACAGGCCAGGA
TGTTCTCCTTTGATTTTTGGGCGATACTCAGAGCAGAAGAGGAAGAAGGCCGAACTAAAAAAAAAATTAA
TTTTAGGATTTTAAGTTAACAGATCACAAAAACAAATACTATCAAGTGTACACTGCATTGCTATTTAAAG
CTGCCTGTGAATTTCTGTGATGCATTGGACAGGGTGCAAATACTATAATATACTAAATATCCTTCACAAC
CAAAGCTTAATTTACAACTATTTAATTTATACTAGCTAGAACCCTAGATGAACATTCTACAATTACACTA
TTTCAAAGGGATAGTATTTTTCAAGAAATAAAAAGATCAAAAGGAGATACACTGGGCAAAGGAGACCAAA
TGTCTAATTCAAATGCTCTGGGAACACTCCCACCCAACAGGAATTTTATACTATTTAAATATAACCAATA
TGAACAAGTATTAGCTAAGAAACTTTGATTGTACATTTACACTCTAAACTGACAAAGTAGCTTGCTAAAT
TTCTCTCAGATTCTACTGTAAAACGTGTCTGGGAAGTAAAAACAGGCAAGATACTCACGGAGGCCTCTTG
GGTGCATTGGGATCCTTGAACTTCTTTTTTGTCTCCCCTTTGGGAGGGATATAGGTTTTCATTTCTCTTT
CATAACGGGCCTTGTCCGCTTTTGCCATATCTTCAAATTTTCCTTTCTCTTTAGCAGACATGGTCTACAA
AATAATTATTTGTAAGTTTAAGTTGTAACATTTAAGTAAATTATCCTCAAAACCAATGTCTTTTGCTATG
TAATAGCGTCCCACTACGAGAATGCCAACTAGGCTTTTTTTTGCATCCTCAATTGGAAACTGTCTTTTAA
TTACCTTGTTAGCATGTTTTAAGCCCTCTTACCTTCCACCTCTCTGAGCACTTCTTAGAAAACTCTGAGA
AGTTGACTGAAGCATCTGGGTGCTTCTTCTTATGCTCCTCCCGACAAGTTTGCACAAAAAATGCATATGA
TGACATTTTGCCTCTCGGCTTCTTAGGATCTCCTTTGCCCATGTTTAGTTATTTTTCTAAAAAATAAAAT
AAATATTTGATGTTAGCAATAAAATTATGACATATAAGACCTTAAAGTACTTAGTAAGGGAATGAAAACC
AAAGTACTGGTTATTTAACACAGTAGCGACATCAACCTCCGTAAAATCAGACAAGAATATGGCCGAGAGA
TTAAATTCCTTGAAGGGGCTATGCCAAGCAAACAAAACAAAACAAAAACAGTCCTTCAGGGCGATCTCAA
AAAGTCTAGACACAAAGATATACCCATACAGTATTCCCTATCTATCCGCCCGAGTCTGCTCTGAATGAGT
ATCTAACTGGTCACTTAAACGATTTTAAAATCTAGAACACCATTTTAAACCAACCAAACCAAAGGTCAGA
AAACATGCTGCCAATTCGTGGCTTTGCACTAGATAGGGAATAAACAAGGGCCTAAGCGAGTCGACTCTTC
CTAATTATGGGACCTTAAAAAAAAAAAATCACCGTGCACCGAAAGTTTCAAAAAACACCCTCTTTGCATA
AAACTTTGCTCCAAAGAGGGAGCAGCAGCCAGCTCCGGTGCTCGGAACCCGGTTGGGGGGTGGCGGTGCC
ACCGCGAGGCAGCCTCGTTTCCTATCGGTTTGGCCCTGAGATGTATTTCTGTTCTGACTAAACACGTCCG
GTCTGAAGTTTCTCCGAGTAAACAAGGATGAGGGACAAAAGCCACTCCTGCTCGTGGCTCGGTGGCCCCC
TCCCCCAACTCGGGAAGTATTTTTTGGAGCCGTGAAAGTTGGGGTGACTCCTGCGCGGGGCGAGCCCCCC
GCCCCTAGAACTTCGCCGGTGGCCGCGCGGCCGAGGAGAGAGGACGCGGCCCGGCTCCCAGGCCCGAGGC
CGCCACGTGCGCCCGGCAGGCCCTGCAGGCCCGCGCCGCCGCCGCCCCCATTTTGTCAGGCTCGGCGCAG
GGAGAAGCCCCGCTCGAAATGGGGGCTGGCTCCGCCCGCGGCCGCCGGGGCCGGCGCGCACGGAATGGCC
GCTGCGCGTCTTCTCCGCCTGCGCCGCCGCCGCCGCGAGGGCGAGCGCGAGCGAGAATATGGCTCCTTCC
CTTTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAGAGAGTGTGTGAGTGCGAGGGTGCGGGCGCGGCGGC
GGCGGCGGGCGGGGTGCGAGCCGCGCTCTGGCGCACACACTCGGCCATTACGGCCGGGGGAGGGGCGGGG
GGCGCGCGGCCGGGCCCTCCCCTCCGCGCCGCTCCCCTCCCCCCGCCGCGGTGGGGGCCGCCCGAGGGCC
CACCCGCCCGCCACTCCCCGTCTCCCTCCGCGCGGGCCGCGCGCCCCGCCGCCCCCGCACGGAGAACGCG
GGGCTGTGAAAAGAGAGAGGAAAAAAAAAGTTGCCTCGGAACTGCTGCGCCCAGCTCCCCCGCCCGCCCG
CCTTGTTTTCTCTCCAGCCAGCAGCGCCGGGCCCGAGTCAGCCATGTTCCAGCGAGCGCAGCGGCGCCGC
TCCCCCCGCCGCCCGGCCGCCGCCGCCGCCGCGACCGGGCCGAGGCCGGCCGGGCCCGCACTGCCGCCCC
CAGGCCCCCGCGCCGCCCTCGCCCGCCGCGGCGCCCCGCCCGCCCCGCCGCCCGCCCGGCTGGCCGCGCT
CCCCGCCAGCGCCCGGCTCGCTGCGGCGGCGGCCAATGCAGCCCGGGGAAGCGCCGCCGCTGCCCTCCCG
CCGCCGCCGCCGAGCCGCGCCGGCCCCGCCGCCCCGGCCGCGCTCCGCGCACGCCGCCCGCCCGAACGCC
CGGCCCGAGGGCCCAAAACACGTTCAAAATTTTTTTAATTAAAAAAAAAATTTTTTTTTTTGCGCCAGTC
AGCGCGGACGCCGCCGGGGGTGGAAACTCGCGGGGCGCGGGGCTCCCGGCGCCTCAGGCTGCCTGAGGGC
CGGGGCACCGGCGCGGGGCAGCGTTCCCGGCGCCCGGGCAGAGGCTCGCTCCGTGCGCAGTTCCCCCCAC
GGTCCCCCCTCATTTGCCTTTGTGTGGATCCTGACCCGCCGGCTCCCGGCCGCGGGGATCCGGCCGCCGC
GCGGGCTGGGGAGCTGCCGGAGGCGCTCTCCCCGCCGCGGCGCTGCCCCAGACTCACCCTCAGCGAGGCA
CAGAGTCGCCCAGTGCCCGTCCGGCTCTCACTTGCCCCGGTGCTGTCTCTATGGAGCTCAATGTACTGCA
ATGGCTGTGAGAGCGGGAGCCAGACGCAGCCTCCTCACTCTCTCCGCTCTGTAACATTACTCTCC
Protein Sequence
>gi|4504425|ref|NP_002119.1| high mobility group protein B1 [Homo sapiens]
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR
YEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD
KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE
DDDDE
Molecule Role Vaximmutor
Related Vaccines(s) YF-Vax
References