<?xml version="1.0" encoding="UTF-8"?>
<VIOLIN>
	<pathogen pathogen_id="pathogen239">
		<pathogen_name>Hirame rhabdovirus</pathogen_name>
		<taxon_id>38142</taxon_id>
		<pathogenesis refs=""></pathogenesis>
		<disease_name></disease_name>
		<protective_immunity refs=""></protective_immunity>
		<host_range refs=""></host_range>
		<introduction refs="reference2759">Hirame rhabdovirus (HIRRV) is one of the four recognized species within the Novirhabdovirus genus, represented by the type species Infectious Haematopoietic Necrosis (IHNV). HIRRV was first isolated during an outbreak on cultured flounder (Paralichthys olivaceus) and ayu (Plecoglossus altivelis) in Japan. It was also found on other marine fish in Asia, such as stone flounder (Kareius bicoloratus) in China. Furthermore, it was shown to be pathogenic for a range of salmonids species, including rainbow trout, experimentally challenged in freshwater. The major clinical signs of HIRRV infection were congestion of the gonads, focal hemorrhages of the skeletal muscle and fins and ascitic fluid collection (Borzym et al., 2012).</introduction>
	</pathogen>

	<host host_id="host55">
		<common_name>Baboon</common_name>
		<scientific_name>Papio cynocephalus</scientific_name>
		<taxon_id>9556</taxon_id>
    </host>
	<host host_id="host43">
		<common_name>Bank vole</common_name>
		<scientific_name>Clethrionomys glareolus</scientific_name>
		<taxon_id>447135</taxon_id>
    </host>
	<host host_id="host31">
		<common_name>Bear</common_name>
		<scientific_name>Ursus americanus</scientific_name>
		<taxon_id>9643</taxon_id>
    </host>
	<host host_id="host51">
		<common_name>Birds</common_name>
		<scientific_name>Passeroidea</scientific_name>
		<taxon_id>175121</taxon_id>
    </host>
	<host host_id="host35">
		<common_name>Brown Trout</common_name>
		<scientific_name>Salmo trutta</scientific_name>
		<taxon_id>8032</taxon_id>
    </host>
	<host host_id="host30">
		<common_name>Buffalo</common_name>
		<scientific_name>Bison bison</scientific_name>
		<taxon_id>9901</taxon_id>
    </host>
	<host host_id="host53">
		<common_name>Carnivores</common_name>
		<scientific_name>Vulpes</scientific_name>
		<taxon_id>9625</taxon_id>
    </host>
	<host host_id="host37">
		<common_name>Cat</common_name>
		<scientific_name>Felis catus</scientific_name>
		<taxon_id>9685</taxon_id>
    </host>
	<host host_id="host52">
		<common_name>Catfishes</common_name>
		<scientific_name>Siluriformes</scientific_name>
		<taxon_id>7995</taxon_id>
    </host>
	<host host_id="host12">
		<common_name>Cattle</common_name>
		<scientific_name>Bos taurus</scientific_name>
		<taxon_id>9913</taxon_id>
    </host>
	<host host_id="host8">
		<common_name>Chicken</common_name>
		<scientific_name>Gallus gallus</scientific_name>
		<taxon_id>9031</taxon_id>
    </host>
	<host host_id="host42">
		<common_name>Chimpanzee</common_name>
		<scientific_name>Pan troglodytes</scientific_name>
		<taxon_id>9598</taxon_id>
    </host>
	<host host_id="host26">
		<common_name>chinchillas</common_name>
		<scientific_name>Chinchillidae</scientific_name>
		<taxon_id>10150</taxon_id>
    </host>
	<host host_id="host24">
		<common_name>Copper Pheasant</common_name>
		<scientific_name>Syrmaticus soemmerringii</scientific_name>
		<taxon_id>9067</taxon_id>
    </host>
	<host host_id="host29">
		<common_name>Deer</common_name>
		<scientific_name>Cervus elaphus</scientific_name>
		<taxon_id>9860</taxon_id>
    </host>
	<host host_id="host32">
		<common_name>Deer mouse</common_name>
		<scientific_name>Peromyscus maniculatus</scientific_name>
		<taxon_id>10042</taxon_id>
    </host>
	<host host_id="host36">
		<common_name>Dog</common_name>
		<scientific_name>Canis familiaris</scientific_name>
		<taxon_id>9615</taxon_id>
    </host>
	<host host_id="host9">
		<common_name>Ducks</common_name>
		<scientific_name>Anas</scientific_name>
		<taxon_id>8835</taxon_id>
    </host>
	<host host_id="host19">
		<common_name>Ferret</common_name>
		<scientific_name>Mustela putorius furo</scientific_name>
		<taxon_id>9669</taxon_id>
    </host>
	<host host_id="host48">
		<common_name>Fish</common_name>
		<scientific_name>Hyperotreti</scientific_name>
		<taxon_id>117565</taxon_id>
    </host>
	<host host_id="host41">
		<common_name>Gerbil</common_name>
		<scientific_name>Gerbillina</scientific_name>
		<taxon_id>10045</taxon_id>
    </host>
	<host host_id="host13">
		<common_name>Goat</common_name>
		<scientific_name>Capra hircus</scientific_name>
		<taxon_id>9925</taxon_id>
    </host>
	<host host_id="host47">
		<common_name>Gray wolf</common_name>
		<scientific_name>Canis lupus</scientific_name>
		<taxon_id>9612</taxon_id>
    </host>
	<host host_id="host7">
		<common_name>Guinea pig</common_name>
		<scientific_name>Cavia porcellus</scientific_name>
		<taxon_id>10141</taxon_id>
    </host>
	<host host_id="host16">
		<common_name>Hamster</common_name>
		<scientific_name>Mesocricetus auratus</scientific_name>
		<taxon_id>10036</taxon_id>
    </host>
	<host host_id="host18">
		<common_name>Horse</common_name>
		<scientific_name>Equus caballus</scientific_name>
		<taxon_id>9796</taxon_id>
    </host>
	<host host_id="host2">
		<common_name>Human</common_name>
		<scientific_name>Homo sapiens</scientific_name>
		<taxon_id>9606</taxon_id>
    </host>
	<host host_id="host39">
		<common_name>Macaque</common_name>
		<scientific_name>Macaca fascicularis</scientific_name>
		<taxon_id>9541</taxon_id>
    </host>
	<host host_id="host40">
		<common_name>Mongolian Gerbil</common_name>
		<scientific_name>Meriones unguiculatus</scientific_name>
		<taxon_id>10047</taxon_id>
    </host>
	<host host_id="host5">
		<common_name>Monkey</common_name>
		<scientific_name>Platyrrhini</scientific_name>
		<taxon_id>9479</taxon_id>
    </host>
	<host host_id="host3">
		<common_name>Mouse</common_name>
		<scientific_name>Mus musculus</scientific_name>
		<taxon_id>10090</taxon_id>
    </host>
	<host host_id="host59">
		<common_name>None</common_name>
		<scientific_name>None</scientific_name>
		<taxon_id></taxon_id>
    </host>
	<host host_id="host50">
		<common_name>Parrot</common_name>
		<scientific_name>Psittacidae</scientific_name>
		<taxon_id>9224</taxon_id>
    </host>
	<host host_id="host15">
		<common_name>Pig</common_name>
		<scientific_name>Sus scrofa</scientific_name>
		<taxon_id>9823</taxon_id>
    </host>
	<host host_id="host6">
		<common_name>Rabbit</common_name>
		<scientific_name>Oryctolagus cuniculus</scientific_name>
		<taxon_id>9986</taxon_id>
    </host>
	<host host_id="host45">
		<common_name>Rainbow trout</common_name>
		<scientific_name>Oncorhynchus mykiss</scientific_name>
		<taxon_id>8022</taxon_id>
    </host>
	<host host_id="host4">
		<common_name>Rat</common_name>
		<scientific_name>Rattus</scientific_name>
		<taxon_id>10114</taxon_id>
    </host>
	<host host_id="host34">
		<common_name>Raven</common_name>
		<scientific_name>Corvus corax</scientific_name>
		<taxon_id>56781</taxon_id>
    </host>
	<host host_id="host54">
		<common_name>sei whale</common_name>
		<scientific_name>Balaenoptera borealis</scientific_name>
		<taxon_id>9768</taxon_id>
    </host>
	<host host_id="host17">
		<common_name>Sheep</common_name>
		<scientific_name>Ovis aries</scientific_name>
		<taxon_id>9940</taxon_id>
    </host>
	<host host_id="host28">
		<common_name>Squirrel</common_name>
		<scientific_name>Spermophilus richardsonii</scientific_name>
		<taxon_id>37591</taxon_id>
    </host>
	<host host_id="host44">
		<common_name>Tree shrew</common_name>
		<scientific_name>Tupaiidae</scientific_name>
		<taxon_id>9393</taxon_id>
    </host>
	<host host_id="host49">
		<common_name>Trouts, salmons & chars</common_name>
		<scientific_name>Salmoninae</scientific_name>
		<taxon_id>504568</taxon_id>
    </host>
	<host host_id="host38">
		<common_name>Turkey</common_name>
		<scientific_name>Meleagris gallopavo</scientific_name>
		<taxon_id>9103</taxon_id>
    </host>
	<host host_id="host33">
		<common_name>Vole</common_name>
		<scientific_name>Microtus ochrogaster</scientific_name>
		<taxon_id>79684</taxon_id>
    </host>
	<host host_id="host27">
		<common_name>Water buffalo</common_name>
		<scientific_name>Bubalus bubalis</scientific_name>
		<taxon_id>391902</taxon_id>
    </host>
	<vaccine vaccine_id="vaccine3940">
		<vaccine_name>H. rhabdovirus DNA Vaccine encoding G</vaccine_name>
		<proper_name></proper_name>
		<brand_name></brand_name>
		<manufacturer></manufacturer>
		<vo_id>VO_0004583</vo_id>
		<type>Live, attenuated vaccine</type>
		<status>Licensed</status>
		<vector></vector>
		<route>Intramuscular injection (i.m.)</route>
		<location_licensed></location_licensed>
		<description refs=""></description>
		<adjuvant refs=""></adjuvant>
		<storage refs=""></storage>
		<virulence refs=""></virulence>
		<preparation refs=""></preparation>
		<route refs="">Intramuscular injection (i.m.)</route>
		<antigen refs=""></antigen>

		<gene_engineering gene_engineering_id="gene_engineering1555" gene_id="gene1661">
			<type>DNA vaccine construction</type>
			<description refs=""></description>
		</gene_engineering>
		<host_response host_response_id="host_response1587" host_id="host48">
			<immune_response refs="reference2693">Both cellular and humoral immune responses are involved in the protection of fish immunized with DNA vaccine. Induction of specific antibody response has been observed from rainbow trout immunized with rhabdovirus G protein constructs. However, despite high levels of protection, neutralizing antibodies could not be detected in all vaccinated fish at the time of challenge, or survivors of the challenge (Seo et al., 2006).</immune_response>
			<host_strain refs=""></host_strain>
			<vaccination_protocol refs="reference2693">Five groups of forty flounder fry with a mean weight of 3 g were prepared for injection with pcDNA-G, pcDNA-N, a pcDNA-G and pcDNA-N mixture, pcDNA3.1(+) vector, or PBS (Seo et al., 2006).</vaccination_protocol>
			<persistence refs=""></persistence>
			<immune_response_type refs="">VO_0003057</immune_response_type>
			<immune_response_type refs=""></immune_response_type>
			<protection_efficacy refs="reference2693">Groups injected with the pcDNA-G showed only 5% cumulative mortality. Control groups injected with plasmid only or PBS only showed at least 95% mortality. These results demonstrated the protective effect of this DNA vaccine against HIRRV infection (Seo et al., 2006).</protection_efficacy>
			<side_effects refs=""></side_effects>
			<challenge_protocol refs="reference2693">At 21 days post vaccination, flounder fry injected with different DNA vaccines were challenged by immersion in water containing 1.2 Ã— 104 TCID mlâˆ’1 HIRRV (Seo et al., 2006).</challenge_protocol>
			<description refs=""></description>
		</host_response>
	</vaccine>
	<vaccine vaccine_id="vaccine3923">
		<vaccine_name>H. rhabdovirus DNA Vaccine encoding N and G</vaccine_name>
		<proper_name></proper_name>
		<brand_name></brand_name>
		<manufacturer></manufacturer>
		<vo_id>VO_0004567</vo_id>
		<type>DNA vaccine</type>
		<status>Research</status>
		<vector>pcDNA-G and pcDNA-N [Ref2693:Seo et al., 2006]</vector>
		<route>Intramuscular injection (i.m.)</route>
		<location_licensed></location_licensed>
		<description refs=""></description>
		<adjuvant refs=""></adjuvant>
		<storage refs=""></storage>
		<virulence refs=""></virulence>
		<preparation refs=""></preparation>
		<route refs="">Intramuscular injection (i.m.)</route>
		<antigen refs=""></antigen>

		<gene_engineering gene_engineering_id="gene_engineering1470" gene_id="gene1660">
			<type>DNA vaccine construction</type>
			<description refs=""></description>
		</gene_engineering>

		<gene_engineering gene_engineering_id="gene_engineering1471" gene_id="gene1661">
			<type>DNA vaccine construction</type>
			<description refs=""></description>
		</gene_engineering>
		<host_response host_response_id="host_response1569" host_id="host55">
			<immune_response refs="reference2693">Both cellular and humoral immune responses are involved in the protection of fish immunized with DNA vaccine. Induction of specific antibody response has been observed from rainbow trout immunized with rhabdovirus G protein constructs. However, despite high levels of protection, neutralizing antibodies could not be detected in all vaccinated fish at the time of challenge, or survivors of the challenge (Seo et al., 2006).</immune_response>
			<host_strain refs=""></host_strain>
			<vaccination_protocol refs="reference2693">Five groups of forty flounder fry with a mean weight of 3 g were prepared for injection with pcDNA-G, pcDNA-N, a pcDNA-G and pcDNA-N mixture, pcDNA3.1(+) vector, or PBS (Seo et al., 2006).</vaccination_protocol>
			<persistence refs=""></persistence>
			<immune_response_type refs="">VO_0003057</immune_response_type>
			<immune_response_type refs=""></immune_response_type>
			<protection_efficacy refs="reference2693">Groups injected with the mixed pcDNA-N+pcDNA-G vaccine showed only 2.5% cumulative mortality. Control groups injected with plasmid only or PBS only showed at least 95% mortality. These results demonstrated the protective effect of this DNA vaccine against HIRRV infection (Seo et al., 2006).</protection_efficacy>
			<side_effects refs=""></side_effects>
			<challenge_protocol refs="reference2693">At 21 days post vaccination, flounder fry injected with different DNA vaccines were challenged by immersion in water containing 1.2 Ã— 10^4 TCID mlâˆ’1 HIRRV (Seo et al., 2006).</challenge_protocol>
			<description refs=""></description>
		</host_response>
	</vaccine>
	<vaccine vaccine_id="vaccine3682">
		<vaccine_name>H. rhabdovirus DNA vaccine pHRV-G encoding HIRRV and VHSV G proteins</vaccine_name>
		<proper_name></proper_name>
		<brand_name></brand_name>
		<manufacturer></manufacturer>
		<vo_id>VO_0004419</vo_id>
		<type>DNA vaccine</type>
		<status>Research</status>
		<vector>pCI-neo [Ref2337:Yasuike et al., 2007]</vector>
		<route>Intramuscular injection (i.m.)</route>
		<location_licensed></location_licensed>
		<description refs=""></description>
		<adjuvant refs=""></adjuvant>
		<storage refs=""></storage>
		<virulence refs=""></virulence>
		<preparation refs=""></preparation>
		<route refs="">Intramuscular injection (i.m.)</route>
		<antigen refs=""></antigen>

		<gene_engineering gene_engineering_id="gene_engineering1475" gene_id="gene1661">
			<type>DNA vaccine construction</type>
			<description refs=""></description>
		</gene_engineering>
		<host_response host_response_id="host_response1450" host_id="host48">
			<immune_response refs="reference2337">A type I IFN system was stimulated by vaccination with pHRV-G in the Japanese flounder, which contributes not only to innate immunity but also to acquired immunity. In addition, type I IFN plays a role in Th1 polarization of the immune response induced by DNA vaccination (Yasuike et al., 2007).</immune_response>
			<host_strain refs=""></host_strain>
			<vaccination_protocol refs=""></vaccination_protocol>
			<persistence refs=""></persistence>
			<immune_response_type refs=""></immune_response_type>
			<immune_response_type refs=""></immune_response_type>
			<protection_efficacy refs="reference2337">Fourteen days after the HIRRV challenge, cumulative mortalities of the fish injected with pHRV-G was 13%, as compared to the cumulative mortalities of the control group which was at 98%.  This confirmed previous protection studies which demonstrated the efficacy of this vaccine (Yasuike et al., 2007).</protection_efficacy>
			<side_effects refs=""></side_effects>
			<challenge_protocol refs=""></challenge_protocol>
			<description refs=""></description>
		</host_response>
	</vaccine>
	<gene gene_id="gene1661">
        <gene_name>G glycoprotein</gene_name>
        <strain>Hirame novirhabdovirus</strain>
        <vo_id></vo_id>
        <ncbi_gene_id>2559534</ncbi_gene_id>
        <ncbi_nucleotide_id></ncbi_nucleotide_id>
        <ncbi_protein_id>34610118</ncbi_protein_id>
        <gene_locus_tag>HIRRVgp4</gene_locus_tag>
        <gene_refseq>AF104985</gene_refseq>
        <protein_refseq>NP_919033</protein_refseq>
        <pdb_id></pdb_id>
        <xrefs></xrefs>
        <taxonomy_id>1980915</taxonomy_id>
        <chromosome></chromosome>
        <segment></segment>
        <plasmid></plasmid>
        <gene_start>2923</gene_start>
        <gene_end>4449</gene_end>
        <gene_strand>?</gene_strand>
        <protein_name>glycoprotein</protein_name>
        <protein_pi>6.67</protein_pi>
        <protein_weight>53029.85</protein_weight>
        <protein_length>508</protein_length>
        <protein_note></protein_note>
        <protein_annotation></protein_annotation>
        <dna_sequence>>NC_005093.1:2923-4449 Hirame rhabdovirus, complete genome
CATGGACCCTCGAATAATGTATTACACTGTTCTCCTCACGACAGCTGCCAGAGTCTATGGTCAAACCATC
AAGCCTGGAGTTGACAGCGTATCCGATCAACCCACCTGGGCGAATCCCCTGTTTACATACCCTGTGGACT
GTCCTGCGGCTAAGCTATCCAAGGTGAGTCCCTCACAGTTGAGGTGCCCACGCATATTTGATGATGAAAA
CCGAGGACTCGTTGCCTACCCTGCTGTCATCAGATCCCTATCGGTAGGGAACAATCTTGGGGACATTCAT
ACTCAGGGGGAATACGTCCACAAGGTCCTTTACCGAACCACATGTTCAACAGGGTTCTTTGGGGGCCAAA
CCATAGAGAAGGCCCTAGTAGAGATGAAACTGGCCCCCAGGGAGGTGGGAGTGTATGACACCACGACAGC
CTCAGCACTGTACTTCCCAGCTCCAAGGTGCCAATGGTACACGGACAATGTACATAACGACCTGACATTC
TACTATACGACCGCCAAGAGTGTCCTTAGAGATCCTTACACCCTGGGATTCCTTGATTCTGATTTTATTG
AAGGGAAGTGCTCCAAGTCGCCGTGTCAGACCCATTGGTCAAATGTGGTGTGGAAGGGAGACTCGGGAGT
TGCCGCCTGTGACACGGGGTCTGAGATAAAGGGTCACATATTTGTGGACAAGACCTCCCACCATGTCGTC
AAGGCAACGAGCTATGGACACCACCCATGGGGACTTCATCGAGCTTGCATGATTACCTTCTGTGGAAAAC
CATGGATCAGGACAGACCTAGGGGACCTCATCGCAATCGAATACAATGGCGGGGCGACCCTTCTCGCATT
CCCTGCTTGCAAGGACACCACGGTTGGAATGAGAGGGAGTCTTGACGACTTTGCCTACTTGGATGATCTG
GTGAAGTCATCTGAAAGTCGGGAGGAATGTCTAGAGGCACATGCGGAGATCATCGCTACCAATAGTGTGA
CTCCTTACCTGCTATCCAAATTCAGATCTCCCCACCCAGGAATAAACGATGTCTACGCCATGCATGACGG
GTCCATATACCACGGAAAGTGCATGACCGTTGCCATTGATGAGGTTTCCAAAGATAGACGAACTTATCGT
GCCCACCAGACCTCAGCTTTCGTAGCATGGGGGCATCCCTTCGGTGATGAATGGGGCGGGTTTCACGGTC
TTCATGGCAACGATACTCCTGTGATTCCGGATCTTGAGAAATACGTCGCTCAGTACAAGGTGAGCATGAT
GGACAAGATGGACATTCGCCCCGTTCCGCATCCTAGTGTCCAGATACTCTACAACGACACAGACACCGCA
GACATCACAATCAGGAAGATAGACTCGTTTGATCTGCAATCACTCAACTGGAGCTTCTGGCCATCATTGT
CAGCACTGGGAGGGGTTCCAATACTCCTCGCCCTCGTATTCTTTCTGTACTGCTGCATGAACAGAAGACC
CTCCATGCCTGCAGCACCCCAAGAGATCCCCATGTACCACCTCGCCAGTCGAGGGTA

</dna_sequence>
        <protein_sequence>>NP_919033.1 glycoprotein [Hirame novirhabdovirus]
MDPRIMYYTVLLTTAARVYGQTIKPGVDSVSDQPTWANPLFTYPVDCPAAKLSKVSPSQLRCPRIFDDEN
RGLVAYPAVIRSLSVGNNLGDIHTQGEYVHKVLYRTTCSTGFFGGQTIEKALVEMKLAPREVGVYDTTTA
SALYFPAPRCQWYTDNVHNDLTFYYTTAKSVLRDPYTLGFLDSDFIEGKCSKSPCQTHWSNVVWKGDSGV
AACDTGSEIKGHIFVDKTSHHVVKATSYGHHPWGLHRACMITFCGKPWIRTDLGDLIAIEYNGGATLLAF
PACKDTTVGMRGSLDDFAYLDDLVKSSESREECLEAHAEIIATNSVTPYLLSKFRSPHPGINDVYAMHDG
SIYHGKCMTVAIDEVSKDRRTYRAHQTSAFVAWGHPFGDEWGGFHGLHGNDTPVIPDLEKYVAQYKVSMM
DKMDIRPVPHPSVQILYNDTDTADITIRKIDSFDLQSLNWSFWPSLSALGGVPILLALVFFLYCCMNRRP
SMPAAPQEIPMYHLASRG

</protein_sequence>
        <phi_function>Protective antigen</phi_function>
        <phi_annotation></phi_annotation>
        <phi_function2></phi_function2>
        <phi_annotation2></phi_annotation2>
    </gene>
	<gene gene_id="gene1660">
        <gene_name>N nucleocapsid protein</gene_name>
        <strain>Hirame novirhabdovirus</strain>
        <vo_id></vo_id>
        <ncbi_gene_id>2559538</ncbi_gene_id>
        <ncbi_nucleotide_id></ncbi_nucleotide_id>
        <ncbi_protein_id>34610115</ncbi_protein_id>
        <gene_locus_tag>HIRRVgp1</gene_locus_tag>
        <gene_refseq>AF104985</gene_refseq>
        <protein_refseq>NP_919030</protein_refseq>
        <pdb_id></pdb_id>
        <xrefs></xrefs>
        <taxonomy_id>1980915</taxonomy_id>
        <chromosome></chromosome>
        <segment></segment>
        <plasmid></plasmid>
        <gene_start>166</gene_start>
        <gene_end>1344</gene_end>
        <gene_strand>?</gene_strand>
        <protein_name>nucleocapsid protein</protein_name>
        <protein_pi>4.48</protein_pi>
        <protein_weight>39984.35</protein_weight>
        <protein_length>392</protein_length>
        <protein_note></protein_note>
        <protein_annotation></protein_annotation>
        <dna_sequence>>NC_005093.1:166-1344 Hirame rhabdovirus, complete genome
TATGGCGAACCTTAAGGAAGAATTTGCAGGACTCCGAGGAGTGAAGGGAGGAGCCCTCGAAGACTCTGGC
ACGGAGTATGATCCCACCAAGATCAACCTGACGCTCTACGGGACAGACAAGCTCTATACCCTGGCGATCA
TCAAGAGGGCAGTCAGTCAGGTCGGAGGGTCCCAAACCAACAAAGCACTAGGAATCCTTTGTGCTTTTGT
CACGTCAGAGAACAACCCTGACATGACAGATGCAGCAGTCAAGCTCCTGGTGGACATGAGGTTCAAGGTG
GACGTGGTGCCCGTGGACGACAGGCTCGGTGACAATCTGGATGACCCCAACTCAAAGCTGGCGGAGGTCC
TGACGGAAGAGAACATGGTGGACCTGGTGAAAGGCCTTCTGTTCACTTGTGCCCTGATGGTCAAGTACGA
TGTGGACAAGATGGCCACATACTGCCAGCAGAAGCTGGAGCGACTGGCCAACAGTCAGGGACTCAACGAG
CTGACCCTGATAAGCACGAGTAGGGCAGTTCTGGCTCGGATTGGGGCAGCGGTAAGACCGGGGCAGAAGT
TAACCAAGGCCATCTACGGGATCATTCTTATCAACCTGATGGATCCCGCCACTGCTGCCAGGGCAAAGGC
CCTTTGTGCCATGAGGCTGAGCGGAACCGGAATGACCATGGTGGGTCTATTCAATCAGGCCTCTAAGAAC
CTTGGAGCTCCACCTGCAGATCTGCTGGAAGATCTCTGCATGAAGTCCATCATCGACTCTGCCAGGAGGA
TTGTCAAGCTGATGAGGATCGTTGCAGACGTCGAGGACATGACCGCAAAGTATGCCATCATGATGAGCAG
GATGCTTGGGGATGGGTACTTCAAGTCCTACGGGATCAATGAGAACTCACGGATCACCTGTATCTTGATG
AACATCAACGAGCAGTACGATGAGGGGACAACCGGAGGACTGGCAGGAGTCAGGGTTTCACCCCCCTTCC
GAAAGCTGGCAACCGAGATTGCTCGCCTTCTGGTCAAAAAGTATGACGGGAACGGATCTGCCGGGCCAGG
TGCCTCAGATCTTGTCCGCCAGGCCGAGCAGGCAGCGCAAGAGACCGAGGGCGAGGATGATAAGTACGAT
GAGGAGGGCGAGGAAGACGGAGGGGAGGGAGAGGGGGGAGAGGACGAAGAGTACTACTG

</dna_sequence>
        <protein_sequence>>NP_919030.1 nucleocapsid protein [Hirame novirhabdovirus]
MANLKEEFAGLRGVKGGALEDSGTEYDPTKINLTLYGTDKLYTLAIIKRAVSQVGGSQTNKALGILCAFV
TSENNPDMTDAAVKLLVDMRFKVDVVPVDDRLGDNLDDPNSKLAEVLTEENMVDLVKGLLFTCALMVKYD
VDKMATYCQQKLERLANSQGLNELTLISTSRAVLARIGAAVRPGQKLTKAIYGIILINLMDPATAARAKA
LCAMRLSGTGMTMVGLFNQASKNLGAPPADLLEDLCMKSIIDSARRIVKLMRIVADVEDMTAKYAIMMSR
MLGDGYFKSYGINENSRITCILMNINEQYDEGTTGGLAGVRVSPPFRKLATEIARLLVKKYDGNGSAGPG
ASDLVRQAEQAAQETEGEDDKYDEEGEEDGGEGEGGEDEEYY

</protein_sequence>
        <phi_function>Protective antigen</phi_function>
        <phi_annotation></phi_annotation>
        <phi_function2></phi_function2>
        <phi_annotation2></phi_annotation2>
    </gene>
	<reference reference_id="reference2759">
		<reference_name>Borzym et al., 2012</reference_name>
		<reference_type>website</reference_type>
		<authors>Ewa Borzym, Marek Matras, Joanna Maj, Agnieszka Sandomierska, Niels JÃ¸rgen Olesen, Mette Eliassen, Marine Baud, Chiraz Talbi, Laurent BigarrÃ©</authors>
		<title>First detection of Hirame rhabdovirus (HIRRV) in Europe</title>
		<year>2012</year>
		<volume></volume>
		<issue></issue>
		<pages></pages>
		<journal_book_name></journal_book_name>
		<publisher></publisher>
		<publisher_location></publisher_location>
		<book_editors></book_editors>
		<isbn></isbn>
		<university></university>
		<university_location></university_location>
		<degree></degree>
		<url>http://orbit.dtu.dk/fedora/objects/orbit:112698/datastreams/file_9708708/content</url>
		<file_name></file_name>
	</reference>
	<reference reference_id="reference2693">
		<reference_name>Seo et al., 2006</reference_name>
		<reference_type>journal</reference_type>
		<authors>Seo JY, Kim KH, Kim SG, Oh MJ, Nam SW, Kim YT, Choi TJ</authors>
		<title>Protection of flounder against hirame rhabdovirus (HIRRV) with a DNA vaccine containing the glycoprotein gene</title>
		<year>2006</year>
		<volume>24</volume>
		<issue>7</issue>
		<pages>1009-1015</pages>
		<journal_book_name>Vaccine</journal_book_name>
		<publisher></publisher>
		<publisher_location></publisher_location>
		<book_editors></book_editors>
		<isbn></isbn>
		<university></university>
		<university_location></university_location>
		<degree></degree>
		<url></url>
		<file_name></file_name>
	</reference>
	<reference reference_id="reference2337">
		<reference_name>Yasuike et al., 2007</reference_name>
		<reference_type>journal</reference_type>
		<authors>Yasuike M, Kondo H, Hirono I, Aoki T</authors>
		<title>Difference in Japanese flounder, Paralichthys olivaceus gene expression profile following hirame rhabdovirus (HIRRV) G and N protein DNA vaccination</title>
		<year>2007</year>
		<volume>23</volume>
		<issue>3</issue>
		<pages>531-541</pages>
		<journal_book_name>Fish & shellfish immunology</journal_book_name>
		<publisher></publisher>
		<publisher_location></publisher_location>
		<book_editors></book_editors>
		<isbn></isbn>
		<university></university>
		<university_location></university_location>
		<degree></degree>
		<url></url>
		<file_name></file_name>
	</reference>
</VIOLIN>


