<?xml version="1.0" encoding="UTF-8"?>
<VIOLIN>
	<pathogen pathogen_id="pathogen175">
		<pathogen_name>Feline infectious peritonitis virus</pathogen_name>
		<taxon_id>11135</taxon_id>
		<pathogenesis refs="reference1608">The pathogenesis of FIP may be explained by an increased number of mutants, stochastically arising during bursts of replication (eg, under immune suppression), some of them growing to high concentrations in monocytes and macrophages. Mutations have been identified in non-structural genes, and more may remain to be identified. These highly virulent FPIV mutants have consistently induced FIP under experimental conditions, but their virulence has not been traced to a molecular source. The viral load and the catâ€™s immune response determine whether FIP will develop. Both viral genetics and host immunity are likely to play a role in the development of FIP. The pathology of FIP has been classified into two forms: an effusive (wet) FIP characterised by polyserositis (eg, thoracic and abdominal effusion)and vasculitis, and a non-effusive (dry) FIP characterised by granulomatous lesions in organs (Addie et al., 2009).</pathogenesis>
		<disease_name>Feline infectious peritonitis (FIP)</disease_name>
		<protective_immunity refs="reference1608">It has been suggested that cats mounting a strong cell-mediated immune response do not develop FIP, whereas cats showing a predominantly humoral response progress to disease. Hypergammaglobulinaemia is common in cats with FIP. Also, a drastic depletion of T cells from blood and lymphoid tissues has been described (Addie et al., 2009).</protective_immunity>
		<host_range refs="">Domestic cats</host_range>
		<introduction refs="reference1608">Feline infectious peritonitis virus (FIPV) is a feline coronavirus that causes feline infectious peritonitis. Infection is ubiquitous in domestic cats, especially where conditions are crowded. FIPV can survive in for 7 weeks in a dry environment and may be transmitted indirectly via fomites. FPIV is an enveloped single stranded RNA virus. Most FIPV-infected cats either stay healthy or show only a mild enteritis. Only a proportion of FPIV-infected cats will develop FIP, a pyogranulomatous
vasculitis (Addie et al., 2009).</introduction>
	</pathogen>

	<host host_id="host55">
		<common_name>Baboon</common_name>
		<scientific_name>Papio cynocephalus</scientific_name>
		<taxon_id>9556</taxon_id>
    </host>
	<host host_id="host43">
		<common_name>Bank vole</common_name>
		<scientific_name>Clethrionomys glareolus</scientific_name>
		<taxon_id>447135</taxon_id>
    </host>
	<host host_id="host31">
		<common_name>Bear</common_name>
		<scientific_name>Ursus americanus</scientific_name>
		<taxon_id>9643</taxon_id>
    </host>
	<host host_id="host51">
		<common_name>Birds</common_name>
		<scientific_name>Passeroidea</scientific_name>
		<taxon_id>175121</taxon_id>
    </host>
	<host host_id="host35">
		<common_name>Brown Trout</common_name>
		<scientific_name>Salmo trutta</scientific_name>
		<taxon_id>8032</taxon_id>
    </host>
	<host host_id="host30">
		<common_name>Buffalo</common_name>
		<scientific_name>Bison bison</scientific_name>
		<taxon_id>9901</taxon_id>
    </host>
	<host host_id="host53">
		<common_name>Carnivores</common_name>
		<scientific_name>Vulpes</scientific_name>
		<taxon_id>9625</taxon_id>
    </host>
	<host host_id="host37">
		<common_name>Cat</common_name>
		<scientific_name>Felis catus</scientific_name>
		<taxon_id>9685</taxon_id>
    </host>
	<host host_id="host52">
		<common_name>Catfishes</common_name>
		<scientific_name>Siluriformes</scientific_name>
		<taxon_id>7995</taxon_id>
    </host>
	<host host_id="host12">
		<common_name>Cattle</common_name>
		<scientific_name>Bos taurus</scientific_name>
		<taxon_id>9913</taxon_id>
    </host>
	<host host_id="host8">
		<common_name>Chicken</common_name>
		<scientific_name>Gallus gallus</scientific_name>
		<taxon_id>9031</taxon_id>
    </host>
	<host host_id="host42">
		<common_name>Chimpanzee</common_name>
		<scientific_name>Pan troglodytes</scientific_name>
		<taxon_id>9598</taxon_id>
    </host>
	<host host_id="host26">
		<common_name>chinchillas</common_name>
		<scientific_name>Chinchillidae</scientific_name>
		<taxon_id>10150</taxon_id>
    </host>
	<host host_id="host24">
		<common_name>Copper Pheasant</common_name>
		<scientific_name>Syrmaticus soemmerringii</scientific_name>
		<taxon_id>9067</taxon_id>
    </host>
	<host host_id="host29">
		<common_name>Deer</common_name>
		<scientific_name>Cervus elaphus</scientific_name>
		<taxon_id>9860</taxon_id>
    </host>
	<host host_id="host32">
		<common_name>Deer mouse</common_name>
		<scientific_name>Peromyscus maniculatus</scientific_name>
		<taxon_id>10042</taxon_id>
    </host>
	<host host_id="host36">
		<common_name>Dog</common_name>
		<scientific_name>Canis familiaris</scientific_name>
		<taxon_id>9615</taxon_id>
    </host>
	<host host_id="host9">
		<common_name>Ducks</common_name>
		<scientific_name>Anas</scientific_name>
		<taxon_id>8835</taxon_id>
    </host>
	<host host_id="host19">
		<common_name>Ferret</common_name>
		<scientific_name>Mustela putorius furo</scientific_name>
		<taxon_id>9669</taxon_id>
    </host>
	<host host_id="host48">
		<common_name>Fish</common_name>
		<scientific_name>Hyperotreti</scientific_name>
		<taxon_id>117565</taxon_id>
    </host>
	<host host_id="host41">
		<common_name>Gerbil</common_name>
		<scientific_name>Gerbillina</scientific_name>
		<taxon_id>10045</taxon_id>
    </host>
	<host host_id="host13">
		<common_name>Goat</common_name>
		<scientific_name>Capra hircus</scientific_name>
		<taxon_id>9925</taxon_id>
    </host>
	<host host_id="host47">
		<common_name>Gray wolf</common_name>
		<scientific_name>Canis lupus</scientific_name>
		<taxon_id>9612</taxon_id>
    </host>
	<host host_id="host7">
		<common_name>Guinea pig</common_name>
		<scientific_name>Cavia porcellus</scientific_name>
		<taxon_id>10141</taxon_id>
    </host>
	<host host_id="host16">
		<common_name>Hamster</common_name>
		<scientific_name>Mesocricetus auratus</scientific_name>
		<taxon_id>10036</taxon_id>
    </host>
	<host host_id="host18">
		<common_name>Horse</common_name>
		<scientific_name>Equus caballus</scientific_name>
		<taxon_id>9796</taxon_id>
    </host>
	<host host_id="host2">
		<common_name>Human</common_name>
		<scientific_name>Homo sapiens</scientific_name>
		<taxon_id>9606</taxon_id>
    </host>
	<host host_id="host39">
		<common_name>Macaque</common_name>
		<scientific_name>Macaca fascicularis</scientific_name>
		<taxon_id>9541</taxon_id>
    </host>
	<host host_id="host40">
		<common_name>Mongolian Gerbil</common_name>
		<scientific_name>Meriones unguiculatus</scientific_name>
		<taxon_id>10047</taxon_id>
    </host>
	<host host_id="host5">
		<common_name>Monkey</common_name>
		<scientific_name>Platyrrhini</scientific_name>
		<taxon_id>9479</taxon_id>
    </host>
	<host host_id="host3">
		<common_name>Mouse</common_name>
		<scientific_name>Mus musculus</scientific_name>
		<taxon_id>10090</taxon_id>
    </host>
	<host host_id="host59">
		<common_name>None</common_name>
		<scientific_name>None</scientific_name>
		<taxon_id></taxon_id>
    </host>
	<host host_id="host50">
		<common_name>Parrot</common_name>
		<scientific_name>Psittacidae</scientific_name>
		<taxon_id>9224</taxon_id>
    </host>
	<host host_id="host15">
		<common_name>Pig</common_name>
		<scientific_name>Sus scrofa</scientific_name>
		<taxon_id>9823</taxon_id>
    </host>
	<host host_id="host6">
		<common_name>Rabbit</common_name>
		<scientific_name>Oryctolagus cuniculus</scientific_name>
		<taxon_id>9986</taxon_id>
    </host>
	<host host_id="host45">
		<common_name>Rainbow trout</common_name>
		<scientific_name>Oncorhynchus mykiss</scientific_name>
		<taxon_id>8022</taxon_id>
    </host>
	<host host_id="host4">
		<common_name>Rat</common_name>
		<scientific_name>Rattus</scientific_name>
		<taxon_id>10114</taxon_id>
    </host>
	<host host_id="host34">
		<common_name>Raven</common_name>
		<scientific_name>Corvus corax</scientific_name>
		<taxon_id>56781</taxon_id>
    </host>
	<host host_id="host54">
		<common_name>sei whale</common_name>
		<scientific_name>Balaenoptera borealis</scientific_name>
		<taxon_id>9768</taxon_id>
    </host>
	<host host_id="host17">
		<common_name>Sheep</common_name>
		<scientific_name>Ovis aries</scientific_name>
		<taxon_id>9940</taxon_id>
    </host>
	<host host_id="host28">
		<common_name>Squirrel</common_name>
		<scientific_name>Spermophilus richardsonii</scientific_name>
		<taxon_id>37591</taxon_id>
    </host>
	<host host_id="host44">
		<common_name>Tree shrew</common_name>
		<scientific_name>Tupaiidae</scientific_name>
		<taxon_id>9393</taxon_id>
    </host>
	<host host_id="host49">
		<common_name>Trouts, salmons & chars</common_name>
		<scientific_name>Salmoninae</scientific_name>
		<taxon_id>504568</taxon_id>
    </host>
	<host host_id="host38">
		<common_name>Turkey</common_name>
		<scientific_name>Meleagris gallopavo</scientific_name>
		<taxon_id>9103</taxon_id>
    </host>
	<host host_id="host33">
		<common_name>Vole</common_name>
		<scientific_name>Microtus ochrogaster</scientific_name>
		<taxon_id>79684</taxon_id>
    </host>
	<host host_id="host27">
		<common_name>Water buffalo</common_name>
		<scientific_name>Bubalus bubalis</scientific_name>
		<taxon_id>391902</taxon_id>
    </host>
	<vaccine vaccine_id="vaccine5772">
		<vaccine_name>Feline infectiors peritonitis serum vaccine</vaccine_name>
		<proper_name></proper_name>
		<brand_name></brand_name>
		<manufacturer></manufacturer>
		<vo_id></vo_id>
		<type>Serum contianing ant-FIPV.</type>
		<status>Research</status>
		<vector></vector>
		<route>Intravenous injection (i.v.)</route>
		<location_licensed></location_licensed>
		<description refs="reference5422">A serum containing anti-FIBV produced by an asymptomatic cat was injected into other cats.(Weiss and Scott, 1981)</description>
		<adjuvant refs=""></adjuvant>
		<storage refs=""></storage>
		<virulence refs=""></virulence>
		<preparation refs="reference5422">A healthy 5-month-old kitten with an F1PV serum antibody titer greater than 1:1600 served as the immune serum donor. This animal was an SPF kitten who  had seroconverted by natural  exposure to FIPV-shedding contact cats and had remained asymptomatic.(Weiss and Scott, 1981)</preparation>
		<route refs="">Intravenous injection (i.v.)</route>
		<antigen refs="reference5422">FIPV (Weiss and Scott, 1981)</antigen>
		<host_response host_response_id="host_response2441" host_id="host37">
			<immune_response refs=""></immune_response>
			<host_strain refs=""></host_strain>
			<vaccination_protocol refs="reference5422">Serum was administered by slow intravenous injection and given at a  dosage of 11 ml/kg per cat.(Weiss and Scott, 1981)</vaccination_protocol>
			<persistence refs=""></persistence>
			<immune_response_type refs=""></immune_response_type>
			<immune_response_type refs=""></immune_response_type>
			<protection_efficacy refs="reference5422">Not protected, higher fatality rate than unvaccinated cats. (Weiss and Scott, 1981)</protection_efficacy>
			<side_effects refs=""></side_effects>
			<challenge_protocol refs="">Six hr after administration of serum, the experimental kittens were inoculated intraperitoneally with 0.5 ml of FIPV- infected liver homogenate.</challenge_protocol>
			<description refs=""></description>
		</host_response>
	</vaccine>
	<vaccine vaccine_id="vaccine3243">
		<vaccine_name>Feline infectiour peritonitis virus 3abc mutant vaccine</vaccine_name>
		<proper_name></proper_name>
		<brand_name></brand_name>
		<manufacturer></manufacturer>
		<vo_id>VO_0002961</vo_id>
		<type>Live, attenuated vaccine</type>
		<status>Research</status>
		<vector></vector>
		<route>Oronasal immunization</route>
		<location_licensed></location_licensed>
		<description refs=""></description>
		<adjuvant refs=""></adjuvant>
		<storage refs=""></storage>
		<virulence refs=""></virulence>
		<preparation refs=""></preparation>
		<route refs="">Oronasal immunization</route>
		<antigen refs=""></antigen>

		<gene_engineering gene_engineering_id="gene_engineering782" gene_id="gene1046">
			<type>Gene mutation</type>
			<description refs="reference1986">This 3abc mutant is from Feline infectious peritonitis virus (Haijema et al., 2004).</description>
		</gene_engineering>

		<gene_engineering gene_engineering_id="gene_engineering783" gene_id="gene1047">
			<type>Gene mutation</type>
			<description refs="reference1986">This 3abc mutant is from Feline infectious peritonitis virus (Haijema et al., 2004).</description>
		</gene_engineering>

		<gene_engineering gene_engineering_id="gene_engineering784" gene_id="gene1048">
			<type>Gene mutation</type>
			<description refs="reference1986">This 3abc mutant is from Feline infectious peritonitis virus (Haijema et al., 2004).</description>
		</gene_engineering>
		<host_response host_response_id="host_response1071" host_id="host37">
			<immune_response refs=""></immune_response>
			<host_strain refs=""></host_strain>
			<vaccination_protocol refs=""></vaccination_protocol>
			<persistence refs="reference1986">A 3abc mutant is attenuated in kittens (Haijema et al., 2004).</persistence>
			<immune_response_type refs=""></immune_response_type>
			<immune_response_type refs=""></immune_response_type>
			<protection_efficacy refs="reference1986">A 3abc mutant induces protection in kittens from challenge with wild type FIPV (Haijema et al., 2004).</protection_efficacy>
			<side_effects refs=""></side_effects>
			<challenge_protocol refs=""></challenge_protocol>
			<description refs=""></description>
		</host_response>
	</vaccine>
	<vaccine vaccine_id="vaccine1771">
		<vaccine_name>Feline Infectious Peritonitis Modified Live Virus Vaccine (USDA: 15A1.20)</vaccine_name>
		<proper_name></proper_name>
		<brand_name></brand_name>
		<manufacturer>Pfizer, Inc.</manufacturer>
		<vo_id>VO_0001544</vo_id>
		<type>Live, attenuated vaccine</type>
		<status>Licensed</status>
		<vector></vector>
		<route></route>
		<location_licensed>USA</location_licensed>
		<description refs=""></description>
		<adjuvant refs=""></adjuvant>
		<storage refs=""></storage>
		<virulence refs=""></virulence>
		<preparation refs=""></preparation>
		<route refs=""></route>
		<antigen refs=""></antigen>
	</vaccine>
	<vaccine vaccine_id="vaccine3244">
		<vaccine_name>Feline infectious peritonitis virus 7ab mutant vaccine</vaccine_name>
		<proper_name></proper_name>
		<brand_name></brand_name>
		<manufacturer></manufacturer>
		<vo_id>VO_0002964</vo_id>
		<type>Live, attenuated vaccine</type>
		<status>Research</status>
		<vector></vector>
		<route>Oronasal immunization</route>
		<location_licensed></location_licensed>
		<description refs=""></description>
		<adjuvant refs=""></adjuvant>
		<storage refs=""></storage>
		<virulence refs=""></virulence>
		<preparation refs=""></preparation>
		<route refs="">Oronasal immunization</route>
		<antigen refs=""></antigen>

		<gene_engineering gene_engineering_id="gene_engineering785" gene_id="gene1049">
			<type>Gene mutation</type>
			<description refs="reference1986">This 7ab mutant is from Feline infectious peritonitis virus (Haijema et al., 2004).</description>
		</gene_engineering>

		<gene_engineering gene_engineering_id="gene_engineering786" gene_id="gene1050">
			<type>Gene mutation</type>
			<description refs="reference1986">This 7ab mutant is from Feline infectious peritonitis virus (Haijema et al., 2004).</description>
		</gene_engineering>
		<host_response host_response_id="host_response1072" host_id="host37">
			<immune_response refs=""></immune_response>
			<host_strain refs=""></host_strain>
			<vaccination_protocol refs=""></vaccination_protocol>
			<persistence refs="reference1986">A 7ab mutant is attenuated in kittens (Haijema et al., 2004).</persistence>
			<immune_response_type refs=""></immune_response_type>
			<immune_response_type refs=""></immune_response_type>
			<protection_efficacy refs="reference1986">A 7ab mutant induces protection in kittens from challenge with wild type FIPV (Haijema et al., 2004).</protection_efficacy>
			<side_effects refs=""></side_effects>
			<challenge_protocol refs=""></challenge_protocol>
			<description refs=""></description>
		</host_response>
	</vaccine>
	<vaccine vaccine_id="vaccine6134">
		<vaccine_name>Feline infectious peritonitis virus recombinant N proteins vaccine</vaccine_name>
		<proper_name></proper_name>
		<brand_name></brand_name>
		<manufacturer></manufacturer>
		<vo_id></vo_id>
		<type>Recombinant vector vaccine</type>
		<status>Research</status>
		<vector></vector>
		<route>subcutaneous injection</route>
		<location_licensed></location_licensed>
		<description refs="reference5921">Cell lysate with baculovirus-expressed N protein of the Type I FIPV strain KU-2 recombinant vaccine was effective in preventing the progression of FIP without inducing antibody-dependent enhancement of FIPV infection in cats. (Hohdatsu et al., 2003)</description>
		<adjuvant refs="">2% aluminum hydroxide gels and L80</adjuvant>
		<storage refs=""></storage>
		<virulence refs=""></virulence>
		<preparation refs="reference5921">SF-9 cells cultured for 2 days were inoculated with the recombinant baculovirus. After absorption for 1 h, serum-free TC-100 medium was added to the cells and the cells were cultured at 27 Â°C. After culture for 96 h, the infected cells were recovered and washed with PBS. One milliliter of RSB buffer containing 0.2% NP-40 (0.01 M NaCl, 0.0015 M MgCl2, 0.01 M Trisâ€“HCl, pH 7.4) was added to 1Ã—107 cells and the cell suspension was kept at 4 Â°C for 30 min with occasional shaking. The cells were centrifuged at 800Ã—g for 10 min. The precipitate was resuspended in PBS and used as recombinant N protein. Feline inactivated trivalent vaccine (Felidovac PCR; Intervet, The Netherlands), which is commercially available in Japan, was added to the recombinant N protein as an adjuvant. This feline inactivated trivalent vaccine contains 2% aluminum hydroxide gels and L80 as an adjuvant. (Hohdatsu et al., 2003)</preparation>
		<route refs="">subcutaneous injection</route>
		<antigen refs="reference5921">baculovirus-expressed N protein of the Type I FIPV strain KU-2 (Hohdatsu et al., 2003)</antigen>

		<gene_engineering gene_engineering_id="gene_engineering3001" gene_id="gene4291">
			<type>Recombinant protein preparation</type>
			<description refs="reference5921">(Hohdatsu et al., 2003)</description>
		</gene_engineering>
		<host_response host_response_id="host_response2694" host_id="host37">
			<immune_response refs="reference5921">In all vaccinated cats, the ELISA value against N protein began to increase on Day 6 after the challenge and the antibody responded earlier than that in the control cats. The anti-challenge virus (strain 79-1146) neutralizing antibody production converted to positive on Day 12 after the challenge in the vaccination and control groups, showing no significant difference between the two groups. (Hohdatsu et al., 2003)</immune_response>
			<host_strain refs=""></host_strain>
			<vaccination_protocol refs="reference5921">Eight SPF cats aged 6 months and eight SPF cats aged 7â€“9 months were used in the first and second experiments, respectively. In both experiments, four cats were subcutaneously vaccinated three times with 3-week intervals. The same vaccination/challenge experiment was repeated twice. (Hohdatsu et al., 2003)</vaccination_protocol>
			<persistence refs=""></persistence>
			<immune_response_type refs=""></immune_response_type>
			<immune_response_type refs=""></immune_response_type>
			<protection_efficacy refs="reference5921">Combining the results of the first and second experiments, the survival rates were 75% (6/8) and 12.5% (1/8) for the immunized and control groups, respectively. These survival rates were analyzed using the X2-test, and there was a significant difference (P&lt;0.05). (Hohdatsu et al., 2003)</protection_efficacy>
			<side_effects refs=""></side_effects>
			<challenge_protocol refs="reference5921">As a challenge control, four cats received a subcutaneous administration of the SF-9 cell-derive d antigen, which was prepared as the recombinant N protein described above, with the adjuvant. Four weeks after the third vaccination, all cats were challenged oronasally with 105 TCID50 FIPV strain 79-1146. (Hohdatsu et al., 2003)</challenge_protocol>
			<description refs=""></description>
		</host_response>
	</vaccine>
	<gene gene_id="gene1046">
        <gene_name>3a</gene_name>
        <strain>Feline infectious peritonitis virus</strain>
        <vo_id></vo_id>
        <ncbi_gene_id>10040181</ncbi_gene_id>
        <ncbi_nucleotide_id></ncbi_nucleotide_id>
        <ncbi_protein_id>315192965</ncbi_protein_id>
        <gene_locus_tag>FIPV_gp03</gene_locus_tag>
        <gene_refseq>AY994055</gene_refseq>
        <protein_refseq>YP_004070195</protein_refseq>
        <pdb_id></pdb_id>
        <xrefs></xrefs>
        <taxonomy_id>11135</taxonomy_id>
        <chromosome></chromosome>
        <segment></segment>
        <plasmid></plasmid>
        <gene_start>24860</gene_start>
        <gene_end>25075</gene_end>
        <gene_strand>?</gene_strand>
        <protein_name>putative 3a protein</protein_name>
        <protein_pi>4.49</protein_pi>
        <protein_weight>6974.53</protein_weight>
        <protein_length>71</protein_length>
        <protein_note></protein_note>
        <protein_annotation></protein_annotation>
        <dna_sequence>>gi|315192962:24860-25075 Feline infectious peritonitis virus, complete genome
TATGGACATTGTCAAATCTATTGACATATTCGTAGACGCTGTACTTGACGAACTTGACCGTGCATACTTT
GCTGTAACTCTTAAAGTAGAATTTAAGACTGGTAAACTACTTGTGTGTATAGGTTTTGGTGACACACTTC
TTGAGGCTAAGGACAAAGCGTATGCTAAGCTTGGTCTCTCCTTTATTGAAGAAGTCAATAGTCATACAGT
TGTTTA</dna_sequence>
        <protein_sequence>>gi|315192965|ref|YP_004070195.1| putative 3a protein [Feline infectious peritonitis virus]
MDIVKSIDIFVDAVLDELDRAYFAVTLKVEFKTGKLLVCIGFGDTLLEAKDKAYAKLGLSFIEEVNSHTV
V</protein_sequence>
        <phi_function>Virmugen</phi_function>
        <phi_annotation>A 3abc deletion mutant in Feline infectious peritonitis virus (FIPV) was attenuated and provided protection against virulent FIPV strain 79-1146 challenge in kittens [Ref1986:Haijema et al., 2004].</phi_annotation>
        <phi_function2></phi_function2>
        <phi_annotation2></phi_annotation2>
    </gene>
	<gene gene_id="gene1047">
        <gene_name>3b</gene_name>
        <strain>Feline infectious peritonitis virus</strain>
        <vo_id></vo_id>
        <ncbi_gene_id>10040182</ncbi_gene_id>
        <ncbi_nucleotide_id></ncbi_nucleotide_id>
        <ncbi_protein_id>315192966</ncbi_protein_id>
        <gene_locus_tag>FIPV_gp04</gene_locus_tag>
        <gene_refseq>AY994055</gene_refseq>
        <protein_refseq>YP_004070196</protein_refseq>
        <pdb_id></pdb_id>
        <xrefs></xrefs>
        <taxonomy_id>11135</taxonomy_id>
        <chromosome></chromosome>
        <segment></segment>
        <plasmid></plasmid>
        <gene_start>25020</gene_start>
        <gene_end>25235</gene_end>
        <gene_strand>?</gene_strand>
        <protein_name>putative 3b protein</protein_name>
        <protein_pi>11.43</protein_pi>
        <protein_weight>7960.26</protein_weight>
        <protein_length>71</protein_length>
        <protein_note></protein_note>
        <protein_annotation></protein_annotation>
        <dna_sequence>>gi|315192962:25020-25235 Feline infectious peritonitis virus, complete genome
TATGCTAAGCTTGGTCTCTCCTTTATTGAAGAAGTCAATAGTCATACAGTTGTTTAGTATTACTGTTTAC
AAGTTTAAAGCCAAATTTTGGTATAAACTACCTTTTGAAACTAGACTTTGTATCATTAAACACACAAGAC
CCAAAGCATTAAGTGTTACAAAACAAGTAAAGAGAGATTATAGAAAAATTGCCATTCTAAATTCCATGCG
AAAATG</dna_sequence>
        <protein_sequence>>gi|315192966|ref|YP_004070196.1| putative 3b protein [Feline infectious peritonitis virus]
MLSLVSPLLKKSIVIQLFSITVYKFKAKFWYKLPFETRLCIIKHTRPKALSVTKQVKRDYRKIAILNSMR
K</protein_sequence>
        <phi_function>Virmugen</phi_function>
        <phi_annotation>A 3abc deletion mutant in Feline infectious peritonitis virus (FIPV) was attenuated and provided protection against virulent FIPV strain 79-1146 challenge in kittens [Ref1986:Haijema et al., 2004].</phi_annotation>
        <phi_function2></phi_function2>
        <phi_annotation2></phi_annotation2>
    </gene>
	<gene gene_id="gene1048">
        <gene_name>3c</gene_name>
        <strain>Feline infectious peritonitis virus</strain>
        <vo_id></vo_id>
        <ncbi_gene_id>10040183</ncbi_gene_id>
        <ncbi_nucleotide_id></ncbi_nucleotide_id>
        <ncbi_protein_id></ncbi_protein_id>
        <gene_locus_tag>FIPV_gp05</gene_locus_tag>
        <gene_refseq></gene_refseq>
        <protein_refseq></protein_refseq>
        <pdb_id></pdb_id>
        <xrefs></xrefs>
        <taxonomy_id>11135</taxonomy_id>
        <chromosome></chromosome>
        <segment></segment>
        <plasmid></plasmid>
        <gene_start>25232</gene_start>
        <gene_end>25966</gene_end>
        <gene_strand>?</gene_strand>
        <protein_name></protein_name>
        <protein_pi></protein_pi>
        <protein_weight></protein_weight>
        <protein_length></protein_length>
        <protein_note></protein_note>
        <protein_annotation></protein_annotation>
        <dna_sequence>>gi|315192962:25232-25966 Feline infectious peritonitis virus, complete genome
AATGATTGGTGGACTTTTTCTTAACACTCTTAGTTTTGTAATTGTTAGTAACCATGTTATTGTTAATAAC
ACAGCAAATGTGCATACTACACAACATGAAAATGTTATAGTACAACAGCATTAGGTTGTTAGTGCTAGAA
CACAAAATTATTACCCAGAGTTCAGCATCGCTGTACTCTTTGTATCATTTTTGGCTTTGTACCGTAGTAC
AAACTTTAAGACGTGTGTCGGCATCTTAATGTTTAAGATTGTATCAATGACACTTGTAGGGCCTATGCTT
ATAGCATATGGTTACTACATTGATGGCATTGTTACAATAACTGTCTTAGCTTTAAGATTTTTCTACTTAG
CATACTTTTGGTATGTTAATAGTAGGTCCGAATTTATTTTATACAATACAACGACACTCATGTTTGTACA
TGGCAGAGCTGCACCGTTTATGAGAAGTTCTCACAGCTCTATTTATGTCACATTGTATGGTGGCATAAAT
TATATGTTTGTGAATGACCTCACGTTGCATTTTGTAGACCCTATGCTTGTAAGAATAGCAATACGTGGCT
TAGCTCATGCTGATCTAACTGTTTTTAGAGCAGTTGAACTTCTCAATGGTGATTTTATATATGTATTTTC
ACAGGAGCCCGTAGCCGGTGTTTACAATGCAGCCTCTTCTCAGGCGGTTCTAAACGAAATTGACTTAAAA
GAAGAAGAAGAAGACCATAACTATGACGTTCCCTA</dna_sequence>
        <protein_sequence></protein_sequence>
        <phi_function>Virmugen</phi_function>
        <phi_annotation>A 3abc deletion mutant in Feline infectious peritonitis virus (FIPV) was attenuated and provided protection against virulent FIPV strain 79-1146 challenge in kittens [Ref1986:Haijema et al., 2004].</phi_annotation>
        <phi_function2></phi_function2>
        <phi_annotation2></phi_annotation2>
    </gene>
	<gene gene_id="gene1049">
        <gene_name>7a</gene_name>
        <strain>Feline infectious peritonitis virus</strain>
        <vo_id></vo_id>
        <ncbi_gene_id>10040187</ncbi_gene_id>
        <ncbi_nucleotide_id></ncbi_nucleotide_id>
        <ncbi_protein_id>315192970</ncbi_protein_id>
        <gene_locus_tag>FIPV_gp09</gene_locus_tag>
        <gene_refseq>AY994055</gene_refseq>
        <protein_refseq>YP_004070200</protein_refseq>
        <pdb_id></pdb_id>
        <xrefs></xrefs>
        <taxonomy_id>11135</taxonomy_id>
        <chromosome></chromosome>
        <segment></segment>
        <plasmid></plasmid>
        <gene_start>28151</gene_start>
        <gene_end>28456</gene_end>
        <gene_strand>?</gene_strand>
        <protein_name>non-structural protein 7a</protein_name>
        <protein_pi>8.52</protein_pi>
        <protein_weight>9843.18</protein_weight>
        <protein_length>101</protein_length>
        <protein_note></protein_note>
        <protein_annotation></protein_annotation>
        <dna_sequence>>gi|315192962:28151-28456 Feline infectious peritonitis virus, complete genome
CATGCTCGTTTTCGTCCATGCTGTACTTGTAACAGCTTTAATCTTACTACTAATTGGTAGAATCCAATTA
CTAGAAAGGTTGTTACTCAGTCATCTGCTTAATCTTACAACAGTCAGTAATGTTTTAGGTGTGCCTGACA
GTAGTCTGCGTGTAAATTGTTTGCAGCTTTTGAAACCAGACTGCCTTGATTTTAATATCTTACATAAAGT
TTTAGCAGAAACCAGGTTACTAGTAGTAGTACTGCGAGTGATCTTTCTAGTTCTTCTAGGGTTTTCCTGC
TATACATTGTTGGGTGCATTATTTTA</dna_sequence>
        <protein_sequence>>gi|315192970|ref|YP_004070200.1| non-structural protein 7a [Feline infectious peritonitis virus]
MLVFVHAVLVTALILLLIGRIQLLERLLLSHLLNLTTVSNVLGVPDSSLRVNCLQLLKPDCLDFNILHKV
LAETRLLVVVLRVIFLVLLGFSCYTLLGALF</protein_sequence>
        <phi_function>Virmugen</phi_function>
        <phi_annotation>A 7ab deletion mutant in Feline infectious peritonitis virus is attenuated and provides protection against virulent FIPV strain 79-1146 challenge  in kittens [Ref1986:Haijema et al., 2004].</phi_annotation>
        <phi_function2></phi_function2>
        <phi_annotation2></phi_annotation2>
    </gene>
	<gene gene_id="gene1050">
        <gene_name>7b</gene_name>
        <strain>Feline infectious peritonitis virus</strain>
        <vo_id></vo_id>
        <ncbi_gene_id>10040188</ncbi_gene_id>
        <ncbi_nucleotide_id></ncbi_nucleotide_id>
        <ncbi_protein_id>315192971</ncbi_protein_id>
        <gene_locus_tag>FIPV_gp10</gene_locus_tag>
        <gene_refseq>AY994055</gene_refseq>
        <protein_refseq>YP_004070201</protein_refseq>
        <pdb_id></pdb_id>
        <xrefs></xrefs>
        <taxonomy_id>11135</taxonomy_id>
        <chromosome></chromosome>
        <segment></segment>
        <plasmid></plasmid>
        <gene_start>28461</gene_start>
        <gene_end>29081</gene_end>
        <gene_strand>?</gene_strand>
        <protein_name>non-structural protein 7b</protein_name>
        <protein_pi>7.25</protein_pi>
        <protein_weight>22221.54</protein_weight>
        <protein_length>206</protein_length>
        <protein_note></protein_note>
        <protein_annotation></protein_annotation>
        <dna_sequence>>gi|315192962:28461-29081 Feline infectious peritonitis virus, complete genome
CATGATTGTTGTAATCCTTGTGTGTATCTTTTTGGCTAATGGAATTAAAGCTACTGCTGTGCAAAATGAC
CTTCATGAACATCCCGTTCTTACCTGGGATTTATTACAGCATTTCATAGGACATACCCTCTACATTACAA
CACACCAGGTCTTAGCACTACCGCTTGGATCTCGTGTTGAGTGTGAGGGTATCGAAGGTTTCAATTGCAC
ATGGCCTGGCTTTCAAGATCCTGCACATGATCATATTGATTTCTACTTTGATCTTTCTAATCCTTTCTAT
TCATTTGTAGATAATTTTTATATTGTAAGTGAGGGAAATCAAAGAATCAATCTCAGATTGGTTGGTGCTG
TGCCAAAACAAAAGAGATTAAATGTTGGTTGTCATACATCATTTGCTGTTGATCTTCCATTTGGGATTCA
GATATACCATGACAGGGATTTTCAACACCCTGTTGATGGCAGACATCTAGATTGTACTCACAGAGTGTAC
TTTGTGAAGTACTGTCCACATAACCTGCATGGTTATTGCTTTAATGAGAGGCTGAAAGTTTATGACTTGA
AGCAATTCAGAAGCAAGAAGGTCTTCGACAAAATCAACCAACATCATAAAACTGAGTTATA</dna_sequence>
        <protein_sequence>>gi|315192971|ref|YP_004070201.1| non-structural protein 7b [Feline infectious peritonitis virus]
MIVVILVCIFLANGIKATAVQNDLHEHPVLTWDLLQHFIGHTLYITTHQVLALPLGSRVECEGIEGFNCT
WPGFQDPAHDHIDFYFDLSNPFYSFVDNFYIVSEGNQRINLRLVGAVPKQKRLNVGCHTSFAVDLPFGIQ
IYHDRDFQHPVDGRHLDCTHRVYFVKYCPHNLHGYCFNERLKVYDLKQFRSKKVFDKINQHHKTEL</protein_sequence>
        <phi_function>Virmugen</phi_function>
        <phi_annotation>A 7ab deletion mutant in Feline infectious peritonitis virus is attenuated and provides protection against virulent FIPV strain 79-1146 challenge in kittens [Ref1986:Haijema et al., 2004].</phi_annotation>
        <phi_function2></phi_function2>
        <phi_annotation2></phi_annotation2>
    </gene>
	<gene gene_id="gene4291">
        <gene_name>N</gene_name>
        <strain>Feline infectious peritonitis virus</strain>
        <vo_id></vo_id>
        <ncbi_gene_id></ncbi_gene_id>
        <ncbi_nucleotide_id></ncbi_nucleotide_id>
        <ncbi_protein_id>BAC01159</ncbi_protein_id>
        <gene_locus_tag></gene_locus_tag>
        <gene_refseq></gene_refseq>
        <protein_refseq></protein_refseq>
        <pdb_id></pdb_id>
        <xrefs>CDD:279305</xrefs>
        <taxonomy_id>11135</taxonomy_id>
        <chromosome></chromosome>
        <segment></segment>
        <plasmid></plasmid>
        <gene_start></gene_start>
        <gene_end></gene_end>
        <gene_strand></gene_strand>
        <protein_name>nucleocapsid</protein_name>
        <protein_pi>10.35</protein_pi>
        <protein_weight>40532.64</protein_weight>
        <protein_length>447</protein_length>
        <protein_note>Coronavirus nucleocapsid protein; pfam00937</protein_note>
        <protein_annotation></protein_annotation>
        <dna_sequence></dna_sequence>
        <protein_sequence>>BAC01159.1 nucleocapsid [Feline infectious peritonitis virus]
MATQGQRVNWGDEPSKRRDRSNSRGRKNGNIPLSYFNPITLESGSKFWNICPRDFVPKGIGNKDQQIGYW
NRQVRYRIVRGQRKELPERWFFYFSGTGPHADAKFKDKIDGVFWVARDGAMNKPTTLGTRGTNNESKPLK
FDGKIPPQFQLEVNRSRNNSRSGSQPRSVSRSRSQSRGRQQSNNQNTNVEDTIVAVLSKLGVTDKQRSRS
KSGERNQSKPRDTTPKNANKHTWKKTAGKGDVTNFYGARSSSANFGDSDLVANGNAAKCYPQIAECVPSA
SSILFGSQWSAEEAGDQVKVTLTHTYYLPKDDAKTSQFLEQIDAYKQPSEVAKDQRQRKSRSKSADKKPE
ELSVTLVEAYTDVFDDTQVEMIDEVTN

</protein_sequence>
        <phi_function>Protective antigen</phi_function>
        <phi_annotation>[Ref4956:Takano et al., 2014]</phi_annotation>
        <phi_function2></phi_function2>
        <phi_annotation2></phi_annotation2>
    </gene>
	<reference reference_id="reference1608">
		<reference_name>Addie et al., 2009</reference_name>
		<reference_type>journal</reference_type>
		<authors>Addie D, BelÃ¡k S, Boucraut-Baralon C, Egberink H, Frymus T, Gruffydd-Jones T, Hartmann K, Hosie MJ, Lloret A, Lutz H, Marsilio F, Pennisi MG, Radford AD, Thiry E, Truyen U, Horzinek MC</authors>
		<title>Feline infectious peritonitis. ABCD guidelines on prevention and management</title>
		<year>2009</year>
		<volume>11</volume>
		<issue>7</issue>
		<pages>594-604</pages>
		<journal_book_name>Journal of feline medicine and surgery</journal_book_name>
		<publisher></publisher>
		<publisher_location></publisher_location>
		<book_editors></book_editors>
		<isbn></isbn>
		<university></university>
		<university_location></university_location>
		<degree></degree>
		<url></url>
		<file_name></file_name>
	</reference>
	<reference reference_id="reference1986">
		<reference_name>Haijema et al., 2004</reference_name>
		<reference_type>journal</reference_type>
		<authors>Haijema BJ, Volders H, Rottier PJ</authors>
		<title>Live, attenuated coronavirus vaccines through the directed deletion of group-specific genes provide protection against feline infectious peritonitis</title>
		<year>2004</year>
		<volume>78</volume>
		<issue>8</issue>
		<pages>3863-3871</pages>
		<journal_book_name>Journal of virology</journal_book_name>
		<publisher></publisher>
		<publisher_location></publisher_location>
		<book_editors></book_editors>
		<isbn></isbn>
		<university></university>
		<university_location></university_location>
		<degree></degree>
		<url></url>
		<file_name></file_name>
	</reference>
	<reference reference_id="reference4977">
		<reference_name>Satoh et al., 2011</reference_name>
		<reference_type>journal</reference_type>
		<authors>Satoh R, Furukawa T, Kotake M, Takano T, Motokawa K, Gemma T, Watanabe R, Arai S, Hohdatsu T</authors>
		<title>Screening and identification of T helper 1 and linear immunodominant antibody-binding epitopes in the spike 2 domain and the nucleocapsid protein of feline infectious peritonitis virus</title>
		<year>2011</year>
		<volume>29</volume>
		<issue>9</issue>
		<pages>1791-1800</pages>
		<journal_book_name>Vaccine</journal_book_name>
		<publisher></publisher>
		<publisher_location></publisher_location>
		<book_editors></book_editors>
		<isbn></isbn>
		<university></university>
		<university_location></university_location>
		<degree></degree>
		<url></url>
		<file_name></file_name>
	</reference>
	<reference reference_id="reference4956">
		<reference_name>Takano et al., 2014</reference_name>
		<reference_type>journal</reference_type>
		<authors>Takano T, Tomizawa K, Morioka H, Doki T, Hohdatsu T</authors>
		<title>Evaluation of protective efficacy of the synthetic peptide vaccine containing the T-helper 1 epitope with CpG oligodeoxynucleotide against feline infectious peritonitis virus infection in cats</title>
		<year>2014</year>
		<volume>19</volume>
		<issue>7</issue>
		<pages>645-650</pages>
		<journal_book_name>Antiviral therapy</journal_book_name>
		<publisher></publisher>
		<publisher_location></publisher_location>
		<book_editors></book_editors>
		<isbn></isbn>
		<university></university>
		<university_location></university_location>
		<degree></degree>
		<url></url>
		<file_name></file_name>
	</reference>
</VIOLIN>


