| Gene ID |
Gene Name |
Sequence Strain (Species/Organism) |
VO ID |
NCBI Gene ID |
NCBI Nucleotide GI |
NCBI Protein GI |
Locus Tag |
Genbank Accession |
Protein Accession |
3D structure: PDB ID |
Other Database IDs |
Protein Name |
Molecule Role |
Vaccines Involving this Gene |
|
153
|
env |
Human immunodeficiency virus 1 |
VO_0010937
|
|
|
8218033
|
|
|
|
|
CDD:278917
CDD:295533
CDD:197369
GOA:Q9IBN3
HSSP: 1MEQ
InterPro: IPR000328
InterPro: IPR000777
UniProtKB/TrEMBL: Q9IBN3 |
ENV (gp160) |
Protective antigen |
HIV priming with DNA vaccine expressing HIV gp160 protein and boosted with Ad5/35 vector expressing the same protein
DNA vaccine expressing multiple HIV epitopes
|
|
1240
|
env |
Human immunodeficiency virus 1 |
|
155971
|
|
9629363
|
HIV1gp8 |
AF033819 |
NP_057856 |
|
|
Envelope surface glycoprotein gp160, precursor |
Protective antigen |
HIV DNA vaccine env-pcDNA3.1 encoding env
Combination of HIV DNA vaccine pCMV HIV gag and pCMV HIV gp120 and gp140
HIV DNA vaccine ALVAC-HIV encoding env, gag, and pro
HIV adnenovirus vector vaccine Ad28 encoding env, gag, and pro
HIV DNA vaccine Ad26/Ad5HVR48 encoding HIV or SIV env or gag
HIV DNA vaccine HIV DNA encoding gp160
HIV DNA vaccine pHIS-SHIV-B
HIV recombinant vector vaccine MVA.HIVA encoding env and rev
HIV priming with DNA vaccine expressing HIV gp160 protein and boosted with Ad5/35 vector expressing the same protein
ALVAC-HIV-2- env/gag/pol
|
|
1251
|
env |
Human immunodeficiency virus 1 |
|
|
|
169641099
|
|
|
|
|
CDD:278917
CDD:295533
CDD:197369 |
envelope glycoprotein |
Protective antigen |
|
|
1261
|
env |
Human immunodeficiency virus 1 MN |
|
|
|
3342812
|
|
|
|
|
CDD:278917
CDD:295533
CDD:197369 |
envelope glycoprotein |
Protective antigen |
HIV DNA vaccine APL 400–003 encoding env and rev
HIV DNA vaccine pCMN160
|
|
1266
|
env |
Human immunodeficiency virus 1 |
|
|
|
58043865
|
|
|
|
|
CDD:278917
CDD:295533
CDD:197369 |
envelope glycoprotein |
Protective antigen |
|
|
1273
|
env |
Human immunodeficiency virus 1 |
|
|
|
1129018
|
|
|
|
|
CDD:278917 |
envelope glycoprotein gp120 |
Protective antigen |
|
|
1708
|
env |
Simian-Human immunodeficiency virus strain SHIV89.6P |
|
|
|
72398919
|
|
|
|
|
CDD:278917 |
envelope protein |
Protective antigen |
DNA and poxvirus priming-boosting SHIV vaccine
HIV DNA vaccine SIVmac239 Gag-Pol-Nef and mock Env with rAd5 boost
|
|
1711
|
env |
Simian-Human immunodeficiency virus strain SHIV-89.6 |
|
|
|
2828045
|
|
|
|
|
CDD:278917
CDD:295533
CDD:197369 |
env |
Protective antigen |
HIV DNA vaccine SHIV-89.6 DNA (DNA/89.6)
|
|
1720
|
env |
Human immunodeficiency virus 2 |
|
|
|
1845209
|
|
|
|
|
CDD:278917
CDD:278918
CDD:197369 |
envelope polyprotein |
Protective antigen |
HIV-2 DNA vaccine
ALVAC-HIV-2
|
|
1747
|
env |
Human immunodeficiency virus 1 isolate 715 from Baltimore clone 6 |
|
|
|
475647
|
|
|
|
|
CDD:278917
CDD:295533
CDD:197369 |
envelope glycoprotein |
Protective antigen |
SHIV DNA vaccine encoding env and gag
SHIV(Ba-L) DNA vaccine encoding env and gag
|
|
1748
|
env |
Human immunodeficiency virus 1 strain Ba-L subtype B |
|
|
326367
|
326371
|
|
|
|
|
CDD:278917
CDD:295533
CDD:197369 |
|
Protective antigen |
SHIV DNA vaccine encoding env and gag
SHIV(Ba-L) DNA vaccine encoding env and gag
|
|
1749
|
env |
Human immunodeficiency virus 1 strain 96ZM651 |
|
|
|
13569225
|
|
|
|
|
CDD:278917
CDD:197369 |
envelope glycoprotein |
Protective antigen |
SHIV DNA vaccine encoding env and gag
SHIV(Ba-L) DNA vaccine encoding env and gag
|
|
1750
|
env |
Human immunodeficiency virus 1 strain 976 clone 17 |
|
|
|
475668
|
|
|
|
|
CDD:278917
CDD:295533
CDD:197369 |
envelope glycoprotein |
Protective antigen |
SHIV DNA vaccine encoding env and gag
SHIV(Ba-L) DNA vaccine encoding env and gag
|
|
1752
|
env |
Human immunodeficiency virus 1 isolate 037 clone 08 |
|
|
|
487257
|
|
|
|
|
CDD:278917
CDD:295533
CDD:197369 |
envelope glycoprotein |
Protective antigen |
SHIV(Ba-L) DNA vaccine encoding env and gag
|
|
1250
|
env from SIV |
Simian immunodeficiency virus |
|
1490007
|
|
9627208
|
SIVgp6 |
M58410 |
NP_054372 |
|
|
envelope protein |
Protective antigen |
HIV DNA vaccine Ad26/Ad5HVR48 encoding HIV or SIV env or gag
rMVTT-SIV-gpe
|
|
1242
|
Envelope polyprotein from HXB2 |
Human immunodeficiency virus 1 |
|
|
|
1906385
|
|
|
|
|
CDD:278917
CDD:278918
CDD:197369 |
|
Protective antigen |
|
|
1268
|
gag |
Human immunodeficiency virus 1 |
|
|
|
5081475
|
|
|
|
|
CDD:249943
CDD:279002
CDD:197667
CDD:285867 |
gag |
Protective antigen |
|
|
1272
|
gag |
Human immunodeficiency virus 1 |
|
|
|
1537051
|
|
|
|
|
CDD:249943
CDD:279002
CDD:278525
CDD:197667
CDD:285867 |
gag |
Protective antigen |
|
|
1709
|
gag |
Simian-Human immunodeficiency virus strain SHIV-89.6 |
|
|
|
2828037
|
|
|
|
|
CDD:249943
CDD:279002
CDD:331526 |
gag |
Protective antigen |
HIV DNA vaccine SHIV-89.6 DNA (DNA/89.6)
rBCG-SIVgag and rDIsSIVgag Prime-boost SHIV vaccine
|
|
1717
|
gag |
Human immunodeficiency virus 2 |
|
|
|
1845205
|
|
|
|
|
CDD:249943
CDD:279002
CDD:197667 |
gag polyprotein |
Protective antigen |
HIV-2 DNA vaccine
ALVAC-HIV-2- env/gag/pol
ALVAC-HIV-2
|
|
713
|
Gag from HIV 1 |
Human immunodeficiency virus 1 |
VO_0011263
|
155030
|
|
9629360
|
HIV1gp2 |
AF033819 |
NP_057850 |
|
|
Pr55(Gag) |
Protective antigen |
Combination of HIV DNA vaccine pCMV HIV gag and pCMV HIV gp120 and gp140
HIV DNA vaccine ALVAC-HIV encoding env, gag, and pro
HIV adnenovirus vector vaccine Ad28 encoding env, gag, and pro
HIV DNA vaccine Ad26/Ad5HVR48 encoding HIV or SIV env or gag
HIV DNA vaccine (HIV)-1 gagDNA encoding gag
HIV DNA vaccine pHIV-1gag encoding gag
HIV DNA vaccine Ad5 HIV-1 gag encoding gag
HIV DNA vaccine DNA-CRL1005 with Ad5-gag
HIV recombinant vector vaccine MVA-gag encoding gag
HIV DNA vaccine aroC+Gag encoding gag
DNA vaccine expressing multiple HIV epitopes
L. T -HIV-1 Gag
|
|
1751
|
gag from HIV-1 vector pNL4-3 |
HIV-1 vector pNL4-3 |
|
|
|
12831136
|
|
|
|
|
CDD:249943
CDD:279002
CDD:331526
CDD:312289 |
gag polyprotein |
Protective antigen |
SHIV DNA vaccine encoding env and gag
SHIV(Ba-L) DNA vaccine encoding env and gag
|
|
1265
|
gag from HXB2 |
Human immunodeficiency virus 1 HXB2 |
|
|
|
328450
|
|
|
|
|
CDD:249943 |
gag protein |
Protective antigen |
|
|
98
|
Gag protein from SIV-mnd 2 |
Simian immunodeficiency virus SIV-mnd 2 |
VO_0010949
|
956108
|
|
27311167
|
Siv2gp1 |
AF367411 |
NP_758886 |
|
|
gag protein |
Protective antigen |
HIV DNA and adenoviral vector Ad5 expressing SIV gag protein
Adenoviral vector Ad5 expressing SIV gag protein
HIV DNA vaccine Ad26/Ad5HVR48 encoding HIV or SIV env or gag
HIV recombinant vector vaccine FPV-SIVgag/pol-IFN-γ encoding SIV gag and pol
DNA and poxvirus priming-boosting SHIV vaccine
HIV DNA vaccine pHIS-SHIV-B
HIV DNA vaccine SIVmac239 Gag-Pol-Nef and mock Env with rAd5 boost
|
|
1252
|
gag-pol |
Human immunodeficiency virus 1 |
|
155348
|
|
28872819
|
HIV1gp1 |
AF033819 |
NP_057849 |
|
|
Gag-Pol |
Protective antigen |
HIV DNA vaccine APL 400-047 encoding HIV gag/pol
HIV DNA vaccine pCMN160
|
|
1255
|
gag-pol SIV |
Simian immunodeficiency virus |
|
1490009
|
|
22535297
|
SIVgp1 |
M29973 |
NP_687035 |
|
|
Gag-Pol |
Protective antigen |
|
|
1249
|
gp120 |
Human immunodeficiency virus 1 |
|
|
|
2326505
|
|
|
|
|
CDD:278917
GOA:O40515
InterPro: IPR000777
UniProtKB/TrEMBL: O40515 |
|
Protective antigen |
HIV recombinant canarypox vector vaccine (ALVAC-HIV [vCP1521] for priming and AIDSVAX B/E for boostering
HIV adenovirus vector vaccine Ad35 encoding env gp120
HIV DNA vaccine gp120
HIV DNA vaccine VlJns-tPA-gp120
|
|
1260
|
gp120 |
Human immunodeficiency virus 1 |
|
|
|
7769646
|
|
|
|
|
CDD:278917 |
gp120 |
Protective antigen |
|
|
1247
|
HIV complete genome |
Human immunodeficiency virus 1 |
|
|
388332048
|
388332049
|
|
|
AFK29870.1 |
|
|
gag protein |
Other |
|
|
1274
|
HIV1 ENV |
Human immunodeficiency virus 1 |
|
|
|
1490266
|
|
|
|
|
CDD:197369
GOA:Q76270
InterPro: IPR000328
PDB: 1I5X
PDB: 1I5Y
PDB: 1QR8
PDB: 1QR9
UniProtKB/TrEMBL: Q76270 |
GP41 |
Protective antigen |
|
|
707
|
Nef |
Human immunodeficiency virus 1 |
VO_0011261
|
156110
|
|
28872818
|
HIV1gp9 |
AF033819 |
NP_057857 |
|
|
Nef |
Protective antigen |
DNA vaccine expressing multiple HIV epitopes
|
|
1718
|
nef |
Human immunodeficiency virus 2 |
|
|
|
1845210
|
|
|
|
|
CDD:249884 |
nef protein |
Protective antigen |
HIV-2 DNA vaccine
|
|
1270
|
nef from subtype B |
Human immunodeficiency virus 1 |
|
|
|
108860393
|
|
|
|
|
CDD:109523 |
Nef |
Other |
|
|
1246
|
Nef SIV |
Simian immunodeficiency virus |
|
1490008
|
|
9627209
|
SIVgp7 |
M66437 |
NP_054373 |
|
|
nef protein |
Other |
HIV DNA vaccine SIVmac239 Gag-Pol-Nef and mock Env with rAd5 boost
|
|
1271
|
pol |
Human immunodeficiency virus 1 |
|
|
|
7021456
|
|
|
|
|
CDD:278505
CDD:133149
CDD:238823
CDD:278506
CDD:284283
CDD:284281
CDD:278503
CDD:259998
CDD:280240
CDD:279057 |
pol |
Protective antigen |
DNA vaccine expressing multiple HIV epitopes
|
|
1710
|
pol |
Simian-Human immunodeficiency virus strain SHIV-89.6 |
|
|
|
2828038
|
|
|
|
|
CDD:133149
CDD:295487
CDD:278506
CDD:238185
CDD:284283
CDD:284281
CDD:278503
CDD:259998
CDD:280240
CDD:279057
CDD:278951 |
pol |
Protective antigen |
HIV DNA vaccine SHIV-89.6 DNA (DNA/89.6)
|
|
1269
|
pol from subtype B |
Human immunodeficiency virus 1 |
|
|
|
108860386
|
|
|
|
|
CDD:133149
CDD:73152
CDD:200982
CDD:115473
CDD:203523
CDD:209893
CDD:187690
CDD:202092
CDD:207376
CDD:144223 |
Pol |
Other |
|
|
1245
|
Pol SIV |
Simian immunodeficiency virus SIV-mnd 2 |
|
956107
|
|
27311168
|
Siv2gp2 |
AF367411 |
NP_758887 |
|
|
pol protein |
Other |
HIV recombinant vector vaccine FPV-SIVgag/pol-IFN-γ encoding SIV gag and pol
HIV DNA vaccine pHIS-SHIV-B
HIV DNA vaccine SIVmac239 Gag-Pol-Nef and mock Env with rAd5 boost
rMVTT-SIV-gpe
|
|
1264
|
Polymerase protein |
Human immunodeficiency virus 1 |
|
|
|
6715123
|
|
|
|
|
CDD:133149
CDD:207741
CDD:200982
CDD:73150
CDD:115473 |
polymerase |
Other |
|
|
1248
|
pro |
Human immunodeficiency virus 1 |
|
|
|
19911446
|
|
|
|
|
CDD:133149 |
protease |
Other |
HIV DNA vaccine ALVAC-HIV encoding env, gag, and pro
HIV adnenovirus vector vaccine Ad28 encoding env, gag, and pro
|
|
1713
|
rev |
Simian-Human immunodeficiency virus strain SHIV-89.6 |
|
|
|
2828043
|
|
|
|
|
CDD:278833 |
rev |
Protective antigen |
HIV DNA vaccine SHIV-89.6 DNA (DNA/89.6)
|
|
1263
|
rev from HIV 1 |
Human immunodeficiency virus 1 |
|
155908
|
|
9629359
|
HIV1gp6 |
AF033819 |
NP_057854 |
|
|
Rev |
Protective antigen |
HIV recombinant vector vaccine MVA.HIVA encoding env and rev
DNA vaccine expressing multiple HIV epitopes
HIV DNA vaccine pHIS-SHIV-B
HIV priming with DNA vaccine expressing HIV gp160 protein and boosted with Ad5/35 vector expressing the same protein
|
|
1262
|
rev MN isolate |
Human immunodeficiency virus 1 MN |
|
|
|
3511264
|
|
|
|
|
CDD:189539 |
rev protein |
Other |
HIV DNA vaccine APL 400–003 encoding env and rev
HIV DNA vaccine pCMN160
|
|
711
|
Tat |
Human immunodeficiency virus 1 |
VO_0011262
|
155871
|
|
9629358
|
HIV1gp5 |
AF033819 |
NP_057853 |
|
|
Tat |
Protective antigen |
DNA vaccine expressing multiple HIV epitopes
HIV DNA vaccine pHIS-SHIV-B
|
|
1712
|
tat |
Simian-Human immunodeficiency virus strain SHIV-89.6 |
|
|
|
2828042
|
|
|
|
|
CDD:278940 |
tat |
Protective antigen |
HIV DNA vaccine SHIV-89.6 DNA (DNA/89.6)
|
|
1719
|
tat |
Human immunodeficiency virus 2 |
|
|
|
1845211
|
|
|
|
|
CDD:278940 |
tat protein |
Protective antigen |
HIV-2 DNA vaccine
|
|
1256
|
vif |
Human immunodeficiency virus 1 |
|
155459
|
|
9629361
|
HIV1gp3 |
AF033819 |
NP_057851 |
|
|
Vif |
Other |
|
|
1714
|
vif |
Simian-Human immunodeficiency virus strain SHIV-89.6 |
|
|
|
2828039
|
|
|
|
|
CDD:278957 |
vif |
Protective antigen |
HIV DNA vaccine SHIV-89.6 DNA (DNA/89.6)
|
|
1257
|
vpr |
Human immunodeficiency virus 1 |
|
155807
|
|
28872817
|
HIV1gp4 |
AF033819 |
NP_057852 |
|
|
Vpr |
Other |
|
|
1715
|
vpr |
Simian-Human immunodeficiency virus strain SHIV-89.6 |
|
|
|
2828041
|
|
|
|
|
CDD:278923 |
vpr |
Protective antigen |
HIV DNA vaccine SHIV-89.6 DNA (DNA/89.6)
|
|
1258
|
vpu |
Human immunodeficiency virus 1 |
|
155945
|
|
9629366
|
HIV1gp7 |
AF033819 |
NP_057855 |
|
|
Vpu |
Other |
HIV DNA vaccine pHIS-SHIV-B
|
|
1716
|
vpu |
Simian-Human immunodeficiency virus strain SHIV-89.6 |
|
|
|
2828044
|
|
|
|
|
CDD:109608 |
vpu |
Protective antigen |
HIV DNA vaccine SHIV-89.6 DNA (DNA/89.6)
|
